Q8L860 · TOL9_ARATH

Function

function

Might contribute to the loading of the ESCRT machinery.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytoplasm
Cellular Componentmembrane
Molecular Functionphosphatidylinositol binding
Molecular Functionubiquitin binding
Biological Processprotein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    TOM1-like protein 9

Gene names

    • Name
      TOL9
    • Synonyms
      TOM1D
    • ORF names
      F4D11.40
      , F4D11_40
    • Ordered locus names
      At4g32760

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    Q8L860
  • Secondary accessions
    • O65525

Proteomes

Organism-specific databases

Genome annotation databases

Subcellular Location

Cytoplasm
Membrane
; Peripheral membrane protein

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00004406841-675TOM1-like protein 9

Proteomic databases

PTM databases

Expression

Tissue specificity

Ubiquitously expressed.

Gene expression databases

Interaction

Subunit

Interacts with ELC/VPS23A and ELCL/VPS23B.

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for domain, region, compositional bias.

TypeIDPosition(s)Description
Domain9-138VHS
Region144-181Disordered
Compositional bias145-164Polar residues
Domain180-268GAT
Region270-322Disordered
Compositional bias297-322Polar residues
Compositional bias371-456Polar residues
Region371-524Disordered
Compositional bias471-506Polar residues
Region542-561Disordered
Compositional bias622-641Polar residues
Region622-675Disordered

Sequence similarities

Belongs to the TOM1 family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete

This entry describes 1 isoforms produced by Alternative splicing. Additional isoforms seem to exist.

Q8L860-1

This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

  • Length
    675
  • Mass (Da)
    72,963
  • Last updated
    2002-10-01 v1
  • Checksum
    70A821A1E6DB6619
MVNAMVERATSEMLIGPDWAMNLEICDMLNSDPAQAKDVVKGIKKRIGSRNPKAQLLALTLLETIVKNCGDMVHMHVAEKGVIHEMVRIVKKKPDFHVKEKILVLIDTWQEAFGGPRARYPQYYAGYQELLRAGAVFPQRSERSAPVFTPPQTQPLTSYPPNLRNAGPGNDVPEPSAEPEFPTLSLSEIQNAKGIMDVLAEMLSALEPGNKEDLKQEVMVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLTNYEAIASGLPGTSSQIEKPKSETGKSLVDVDGPLIDTGDSSNQANGATSSSGNGVLNQLALPAPPVTNGSANSKIDLLSGDDLALVPVGPPQPASPVASDQNALALIDMFSDNTNNPSPATAPSGNPAQNIPLNPQGHQQPNSQAGEAGLQQSNGFAPQVGYSQFEQPSYGQGVSSPWSSQPAQQPVQPSYGAQDSTAFPPPPWEAQLQDYSPSAESGSPFSPGMHPTQTAFTHAQPVNNNNPYPQIPQTGPPVNNNSPYAQMPQTGQAVANISPYPQIPQNGVYMPNQPNQALGSGYQPQQQQQQQMMMAQYYAQQQQLQQQQQQQAYGNQMGGYGYGYNQQQQGSSPYLDQQMYGLSMRDQTSHQVASSSSTTSYLPPMKPKNKPEDKLFGDLVDISKFKPTKPTSGRAGTM

Computationally mapped potential isoform sequences

There are 2 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
F4JV51F4JV51_ARATHAt4g32760676
A0A1P8B8V4A0A1P8B8V4_ARATHAt4g32760500

Sequence caution

The sequence CAA18585.1 differs from that shown. Reason: Erroneous translation
The sequence CAB79993.1 differs from that shown. Reason: Erroneous translation

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias145-164Polar residues
Compositional bias297-322Polar residues
Compositional bias371-456Polar residues
Compositional bias471-506Polar residues
Compositional bias622-641Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AL022537
EMBL· GenBank· DDBJ
CAA18585.1
EMBL· GenBank· DDBJ
Genomic DNA Sequence problems.
AL161582
EMBL· GenBank· DDBJ
CAB79993.1
EMBL· GenBank· DDBJ
Genomic DNA Sequence problems.
CP002687
EMBL· GenBank· DDBJ
AEE86114.1
EMBL· GenBank· DDBJ
Genomic DNA
AY120724
EMBL· GenBank· DDBJ
AAM53282.1
EMBL· GenBank· DDBJ
mRNA
BT000033
EMBL· GenBank· DDBJ
AAN15352.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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