Q8L860 · TOL9_ARATH
- ProteinTOM1-like protein 9
- GeneTOL9
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids675 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score4/5
Function
function
Might contribute to the loading of the ESCRT machinery.
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | cytoplasm | |
Cellular Component | membrane | |
Molecular Function | phosphatidylinositol binding | |
Molecular Function | ubiquitin binding | |
Biological Process | protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway |
Keywords
- Biological process
Names & Taxonomy
Protein names
- Recommended nameTOM1-like protein 9
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionQ8L860
- Secondary accessions
Proteomes
Organism-specific databases
Genome annotation databases
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000440684 | 1-675 | TOM1-like protein 9 | |||
Sequence: MVNAMVERATSEMLIGPDWAMNLEICDMLNSDPAQAKDVVKGIKKRIGSRNPKAQLLALTLLETIVKNCGDMVHMHVAEKGVIHEMVRIVKKKPDFHVKEKILVLIDTWQEAFGGPRARYPQYYAGYQELLRAGAVFPQRSERSAPVFTPPQTQPLTSYPPNLRNAGPGNDVPEPSAEPEFPTLSLSEIQNAKGIMDVLAEMLSALEPGNKEDLKQEVMVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLTNYEAIASGLPGTSSQIEKPKSETGKSLVDVDGPLIDTGDSSNQANGATSSSGNGVLNQLALPAPPVTNGSANSKIDLLSGDDLALVPVGPPQPASPVASDQNALALIDMFSDNTNNPSPATAPSGNPAQNIPLNPQGHQQPNSQAGEAGLQQSNGFAPQVGYSQFEQPSYGQGVSSPWSSQPAQQPVQPSYGAQDSTAFPPPPWEAQLQDYSPSAESGSPFSPGMHPTQTAFTHAQPVNNNNPYPQIPQTGPPVNNNSPYAQMPQTGQAVANISPYPQIPQNGVYMPNQPNQALGSGYQPQQQQQQQMMMAQYYAQQQQLQQQQQQQAYGNQMGGYGYGYNQQQQGSSPYLDQQMYGLSMRDQTSHQVASSSSTTSYLPPMKPKNKPEDKLFGDLVDISKFKPTKPTSGRAGTM |
Proteomic databases
PTM databases
Expression
Structure
Family & Domains
Features
Showing features for domain, region, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 9-138 | VHS | ||||
Sequence: ATSEMLIGPDWAMNLEICDMLNSDPAQAKDVVKGIKKRIGSRNPKAQLLALTLLETIVKNCGDMVHMHVAEKGVIHEMVRIVKKKPDFHVKEKILVLIDTWQEAFGGPRARYPQYYAGYQELLRAGAVFP | ||||||
Region | 144-181 | Disordered | ||||
Sequence: SAPVFTPPQTQPLTSYPPNLRNAGPGNDVPEPSAEPEF | ||||||
Compositional bias | 145-164 | Polar residues | ||||
Sequence: APVFTPPQTQPLTSYPPNLR | ||||||
Domain | 180-268 | GAT | ||||
Sequence: EFPTLSLSEIQNAKGIMDVLAEMLSALEPGNKEDLKQEVMVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLTNYEAIAS | ||||||
Region | 270-322 | Disordered | ||||
Sequence: LPGTSSQIEKPKSETGKSLVDVDGPLIDTGDSSNQANGATSSSGNGVLNQLAL | ||||||
Compositional bias | 297-322 | Polar residues | ||||
Sequence: DTGDSSNQANGATSSSGNGVLNQLAL | ||||||
Compositional bias | 371-456 | Polar residues | ||||
Sequence: FSDNTNNPSPATAPSGNPAQNIPLNPQGHQQPNSQAGEAGLQQSNGFAPQVGYSQFEQPSYGQGVSSPWSSQPAQQPVQPSYGAQD | ||||||
Region | 371-524 | Disordered | ||||
Sequence: FSDNTNNPSPATAPSGNPAQNIPLNPQGHQQPNSQAGEAGLQQSNGFAPQVGYSQFEQPSYGQGVSSPWSSQPAQQPVQPSYGAQDSTAFPPPPWEAQLQDYSPSAESGSPFSPGMHPTQTAFTHAQPVNNNNPYPQIPQTGPPVNNNSPYAQM | ||||||
Compositional bias | 471-506 | Polar residues | ||||
Sequence: DYSPSAESGSPFSPGMHPTQTAFTHAQPVNNNNPYP | ||||||
Region | 542-561 | Disordered | ||||
Sequence: QNGVYMPNQPNQALGSGYQP | ||||||
Compositional bias | 622-641 | Polar residues | ||||
Sequence: RDQTSHQVASSSSTTSYLPP | ||||||
Region | 622-675 | Disordered | ||||
Sequence: RDQTSHQVASSSSTTSYLPPMKPKNKPEDKLFGDLVDISKFKPTKPTSGRAGTM |
Sequence similarities
Belongs to the TOM1 family.
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
This entry describes 1 isoforms produced by Alternative splicing. Additional isoforms seem to exist.
Q8L860-1
This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
- Name1
- Length675
- Mass (Da)72,963
- Last updated2002-10-01 v1
- Checksum70A821A1E6DB6619
Computationally mapped potential isoform sequences
There are 2 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
F4JV51 | F4JV51_ARATH | At4g32760 | 676 | ||
A0A1P8B8V4 | A0A1P8B8V4_ARATH | At4g32760 | 500 |
Sequence caution
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 145-164 | Polar residues | ||||
Sequence: APVFTPPQTQPLTSYPPNLR | ||||||
Compositional bias | 297-322 | Polar residues | ||||
Sequence: DTGDSSNQANGATSSSGNGVLNQLAL | ||||||
Compositional bias | 371-456 | Polar residues | ||||
Sequence: FSDNTNNPSPATAPSGNPAQNIPLNPQGHQQPNSQAGEAGLQQSNGFAPQVGYSQFEQPSYGQGVSSPWSSQPAQQPVQPSYGAQD | ||||||
Compositional bias | 471-506 | Polar residues | ||||
Sequence: DYSPSAESGSPFSPGMHPTQTAFTHAQPVNNNNPYP | ||||||
Compositional bias | 622-641 | Polar residues | ||||
Sequence: RDQTSHQVASSSSTTSYLPP |
Keywords
- Coding sequence diversity
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AL022537 EMBL· GenBank· DDBJ | CAA18585.1 EMBL· GenBank· DDBJ | Genomic DNA | Sequence problems. | |
AL161582 EMBL· GenBank· DDBJ | CAB79993.1 EMBL· GenBank· DDBJ | Genomic DNA | Sequence problems. | |
CP002687 EMBL· GenBank· DDBJ | AEE86114.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AY120724 EMBL· GenBank· DDBJ | AAM53282.1 EMBL· GenBank· DDBJ | mRNA | ||
BT000033 EMBL· GenBank· DDBJ | AAN15352.1 EMBL· GenBank· DDBJ | mRNA |