Q8JIG1 · Q8JIG1_DANRE
- ProteinBasic helix-loop-helix ARNT-like protein 1
- Genebmal1b
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids622 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score4/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | aryl hydrocarbon receptor complex | |
Cellular Component | chromatin | |
Cellular Component | CLOCK-BMAL transcription complex | |
Cellular Component | cytoplasm | |
Cellular Component | nucleus | |
Cellular Component | PML body | |
Cellular Component | transcription regulator complex | |
Molecular Function | chromatin binding | |
Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | |
Molecular Function | protein dimerization activity | |
Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | |
Biological Process | circadian rhythm | |
Biological Process | photoperiodism | |
Biological Process | positive regulation of gene expression | |
Biological Process | regulation of gene expression | |
Biological Process | regulation of transcription by RNA polymerase II |
Keywords
- Molecular function
Names & Taxonomy
Protein names
- Recommended nameBasic helix-loop-helix ARNT-like protein 1
- Alternative names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio
Accessions
- Primary accessionQ8JIG1
- Secondary accessions
Proteomes
Organism-specific databases
Subcellular Location
UniProt Annotation
GO Annotation
PTM/Processing
Keywords
- PTM
Expression
Gene expression databases
Interaction
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for compositional bias, region, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-33 | Polar residues | ||||
Sequence: MADQRMDISSTMNEFMSPSSTELISSSMGSTGM | ||||||
Region | 1-36 | Disordered | ||||
Sequence: MADQRMDISSTMNEFMSPSSTELISSSMGSTGMDFN | ||||||
Region | 55-86 | Disordered | ||||
Sequence: DSMDTDKDKPLGRADQQMKNAREAHSQIEKRR | ||||||
Domain | 74-127 | BHLH | ||||
Sequence: NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTL | ||||||
Domain | 145-210 | PAS | ||||
Sequence: SDDELKHLILKAADGFLFVVGCDRGKILFVSESVYKILNYSQNDLIGQSLFDYLHPKDIAKVKEQL | ||||||
Domain | 349-398 | PAS | ||||
Sequence: DGKFVFVDQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMR | ||||||
Region | 469-490 | Disordered | ||||
Sequence: LTAADGSGKTVPGLPGGTRAGA | ||||||
Region | 508-556 | Disordered | ||||
Sequence: RGSSPSSCGSSPLNISNSTPPPDTSSPAARKMSNGGTPDIPSAGLGSGQ | ||||||
Compositional bias | 510-539 | Polar residues | ||||
Sequence: SSPSSCGSSPLNISNSTPPPDTSSPAARKM |
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length622
- Mass (Da)68,222
- Last updated2002-10-01 v1
- Checksum28FFE4CA090B48E2
Computationally mapped potential isoform sequences
There are 3 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A8M2BE61 | A0A8M2BE61_DANRE | bmal1b | 676 | ||
A0A8M9PNL9 | A0A8M9PNL9_DANRE | bmal1b | 671 | ||
A0A8M3BBD8 | A0A8M3BBD8_DANRE | bmal1b | 653 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-33 | Polar residues | ||||
Sequence: MADQRMDISSTMNEFMSPSSTELISSSMGSTGM | ||||||
Compositional bias | 510-539 | Polar residues | ||||
Sequence: SSPSSCGSSPLNISNSTPPPDTSSPAARKM |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
CR318647 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AB087257 EMBL· GenBank· DDBJ | BAC02688.1 EMBL· GenBank· DDBJ | mRNA |