Q8GY55 · TIF4B_ARATH
- ProteinProtein TIFY 4B
- GeneTIFY4B
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids315 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score5/5
Function
function
Regulates the arrest of dispersed meristematic cells during lamina development.
Miscellaneous
Redundant with TIFY 4B/PPD2.
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Aspect | Term | |
---|---|---|
Cellular Component | nucleus | |
Biological Process | leaf development | |
Biological Process | regulation of leaf morphogenesis |
Keywords
- Molecular function
Names & Taxonomy
Protein names
- Recommended nameProtein TIFY 4B
- Alternative names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionQ8GY55
- Secondary accessions
Proteomes
Organism-specific databases
Genome annotation databases
Subcellular Location
Phenotypes & Variants
Disruption phenotype
Plants lacking both TIFY4A and TIFY4B have larger leaves and cotyledon laminae, a dome-shaped leaf curvature and shortened siliques.
Variants
We now provide the "Disease & Variants" viewer in its own tab.
The viewer provides 44 variants from UniProt as well as other sources including ClinVar and dbSNP.
Expression
Developmental stage
First detected at the tip of developing leaf, followed by a tip-to-base progression of the expression.
Gene expression databases
Interaction
Subunit
Interacts with AFPH2/NINJA.
Binary interactions
Type | Entry 1 | Entry 2 | Number of experiments | IntAct | |
---|---|---|---|---|---|
BINARY | Q8GY55 | AFP4 Q9S7Z2 | 3 | EBI-15206004, EBI-1778843 | |
BINARY | Q8GY55 | AFPH2 Q9SV55 | 7 | EBI-15206004, EBI-1787005 | |
BINARY | Q8GY55 | AHP2 Q9ZNV8 | 3 | EBI-15206004, EBI-1100687 | |
BINARY | Q8GY55 | AIP1 Q9LNW3 | 3 | EBI-15206004, EBI-1573499 | |
BINARY | Q8GY55 | IMPA2 F4JL11 | 3 | EBI-15206004, EBI-1253508 | |
BINARY | Q8GY55 | KIX9 Q84JY3 | 3 | EBI-15206004, EBI-4425069 | |
BINARY | Q8GY55 | NFYC2 Q8LCG7 | 3 | EBI-15206004, EBI-2125983 | |
BINARY | Q8GY55 | NFYC4 Q9FMV5 | 3 | EBI-15206004, EBI-2466018 | |
BINARY | Q8GY55 | NFYC9 Q8L4B2 | 3 | EBI-15206004, EBI-2466050 | |
BINARY | Q8GY55 | SCL21 Q9S7H5 | 4 | EBI-15206004, EBI-1238472 | |
BINARY | Q8GY55 | TIFY4A Q7XA73 | 3 | EBI-15206004, EBI-15199673 | |
BINARY | Q8GY55 | TIFY6B Q9LVI4 | 3 | EBI-15206004, EBI-1792431 | |
BINARY | Q8GY55 | TIFY8 Q84MB2 | 3 | EBI-15206004, EBI-4426557 |
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for region, compositional bias, domain, motif.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Region | 113-145 | Disordered | |||
Compositional bias | 122-145 | Polar residues | |||
Domain | 151-186 | Tify | |||
Motif | 233-260 | Jas | |||
Motif | 235-242 | Nuclear localization signal | |||
Region | 248-315 | Disordered | |||
Compositional bias | 266-309 | Polar residues | |||
Sequence similarities
Belongs to the TIFY/JAZ family.
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length315
- Mass (Da)34,849
- Last updated2003-03-01 v1
- ChecksumC971E8E95FA29211
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A1P8B7N6 | A0A1P8B7N6_ARATH | PPD2 | 327 |
Sequence caution
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Compositional bias | 122-145 | Polar residues | |||
Compositional bias | 266-309 | Polar residues | |||
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
Z97336 EMBL· GenBank· DDBJ | CAB10251.1 EMBL· GenBank· DDBJ | Genomic DNA | Sequence problems. | |
AL161539 EMBL· GenBank· DDBJ | CAB78514.1 EMBL· GenBank· DDBJ | Genomic DNA | Sequence problems. | |
CP002687 EMBL· GenBank· DDBJ | AEE83487.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AK117854 EMBL· GenBank· DDBJ | BAC42495.1 EMBL· GenBank· DDBJ | mRNA |