Q8GWZ6 · SRR1_ARATH
- ProteinProtein SENSITIVITY TO RED LIGHT REDUCED 1
- GeneSRR1
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids275 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score4/5
Function
function
Probable regulator involved in a circadian clock input pathway, which is required for normal oscillator function. Regulates the expression of clock-regulated genes such as CCA1 and TOC1. Involved in both the phytochrome B (PHYB) and PHYB-independent signaling pathways.
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | cytoplasm | |
Cellular Component | nucleus | |
Biological Process | circadian rhythm | |
Biological Process | red or far-red light signaling pathway | |
Biological Process | red, far-red light phototransduction | |
Biological Process | regulation of circadian rhythm |
Keywords
- Biological process
Names & Taxonomy
Protein names
- Recommended nameProtein SENSITIVITY TO RED LIGHT REDUCED 1
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionQ8GWZ6
- Secondary accessions
Proteomes
Organism-specific databases
Genome annotation databases
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000186122 | 1-275 | Protein SENSITIVITY TO RED LIGHT REDUCED 1 | |||
Sequence: METTVKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKMEISLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIAILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEANLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVSFDAEVICATKRIIAAQRVTSEFAIETESDDYFAAFHDSSWHFFSSGIDSELPLFVSD |
Proteomic databases
PTM databases
Expression
Structure
Family & Domains
Features
Showing features for region, motif, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 1-49 | Disordered | ||||
Sequence: METTVKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLE | ||||||
Motif | 26-29 | Nuclear localization signal | ||||
Sequence: RRRK | ||||||
Compositional bias | 31-49 | Basic and acidic residues | ||||
Sequence: KPKGQAEEEEQPWKSDDLE |
Sequence similarities
Belongs to the SRR1 family.
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length275
- Mass (Da)31,475
- Last updated2003-05-30 v2
- Checksum4FBE65C784CFFB4E
Sequence caution
Features
Showing features for compositional bias, sequence conflict.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 31-49 | Basic and acidic residues | ||||
Sequence: KPKGQAEEEEQPWKSDDLE | ||||||
Sequence conflict | 207 | in Ref. 5 | ||||
Sequence: G → V | ||||||
Sequence conflict | 209-210 | in Ref. 5 | ||||
Sequence: SF → RS |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AY127047 EMBL· GenBank· DDBJ | AAM97478.1 EMBL· GenBank· DDBJ | mRNA | ||
AB025604 EMBL· GenBank· DDBJ | BAA97490.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CP002688 EMBL· GenBank· DDBJ | AED97205.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CP002688 EMBL· GenBank· DDBJ | AED97206.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AY084714 EMBL· GenBank· DDBJ | AAM61288.1 EMBL· GenBank· DDBJ | mRNA | ||
AK118532 EMBL· GenBank· DDBJ | BAC43135.1 EMBL· GenBank· DDBJ | mRNA | Different initiation |