Q8CHJ4 · Q8CHJ4_RAT

  • Protein
    Transcription factor YY1
  • Gene
    Yy1
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Evidence at protein level
  • Annotation score
    5/5

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentchromatin
Cellular Componentchromatin silencing complex
Cellular ComponentIno80 complex
Cellular Componentnuclear matrix
Cellular Componentnucleus
Cellular ComponentPcG protein complex
Cellular Componenttranscription regulator complex
Molecular Functionchromatin binding
Molecular Functioncis-regulatory region sequence-specific DNA binding
Molecular FunctionDNA binding
Molecular FunctionDNA-binding transcription activator activity, RNA polymerase II-specific
Molecular FunctionDNA-binding transcription factor activity
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specific
Molecular FunctionDNA-binding transcription factor binding
Molecular FunctionDNA-binding transcription repressor activity, RNA polymerase II-specific
Molecular Functionfour-way junction DNA binding
Molecular Functionmetal ion binding
Molecular FunctionRNA binding
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA binding
Molecular Functionsequence-specific DNA binding
Molecular Functionsequence-specific double-stranded DNA binding
Molecular FunctionSMAD binding
Molecular Functiontranscription cis-regulatory region binding
Biological Processanterior/posterior pattern specification
Biological ProcessB cell differentiation
Biological Processcamera-type eye morphogenesis
Biological Processcellular response to interleukin-1
Biological Processcellular response to UV
Biological Processchromatin remodeling
Biological Processchromosome organization
Biological ProcessDNA damage response
Biological Processdouble-strand break repair via homologous recombination
Biological Processgene expression
Biological Processhemopoiesis
Biological Processimmunoglobulin heavy chain V-D-J recombination
Biological Processnegative regulation of cell growth involved in cardiac muscle cell development
Biological Processnegative regulation of gene expression
Biological Processnegative regulation of interferon-beta production
Biological Processnegative regulation of miRNA transcription
Biological Processnegative regulation of transcription by RNA polymerase II
Biological Processpositive regulation of DNA repair
Biological Processpositive regulation of DNA-templated transcription
Biological Processpositive regulation of gene expression
Biological Processpositive regulation of telomere maintenance in response to DNA damage
Biological Processpositive regulation of transcription by RNA polymerase II
Biological Processregulation of cell cycle
Biological Processregulation of chromosome organization
Biological Processregulation of DNA repair
Biological Processregulation of DNA replication
Biological Processregulation of DNA strand elongation
Biological Processregulation of DNA-templated transcription
Biological Processregulation of embryonic development
Biological Processregulation of transcription by RNA polymerase II
Biological Processresponse to prostaglandin F
Biological Processresponse to UV-C
Biological ProcessRNA localization
Biological Processspermatogenesis
Biological Processtelomere maintenance

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Submitted names
    • Transcription factor YY1
    • YY1 transcription factor

Gene names

    • Name
      Yy1
    • Synonyms
      yy1

Organism names

  • Taxonomic identifier
  • Organism
  • Strains
    • BB/OK
    • Brown Norway
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Glires > Rodentia > Myomorpha > Muroidea > Muridae > Murinae > Rattus

Accessions

  • Primary accession
    Q8CHJ4

Proteomes

Organism-specific databases

Subcellular Location

PTM/Processing

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for region, compositional bias, domain.

Type
IDPosition(s)Description
Region32-80Disordered
Compositional bias39-55Acidic residues
Compositional bias66-80Basic residues
Region155-200Disordered
Domain293-317C2H2-type
Domain322-349C2H2-type
Domain350-379C2H2-type
Domain380-409C2H2-type

Sequence similarities

Belongs to the YY transcription factor family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    411
  • Mass (Da)
    44,417
  • Last updated
    2003-03-01 v1
  • MD5 Checksum
    6B561A7135EDF56F0A174D1F4050FB45
MASGDTLYIATDGSEMPAEIVELHEIEVETIPVETIETTVVGEEEDDDEDDEDGGGGDHGGGGGHGHAGHHHHHHHHHHPPMIALQPLVTDDPTQVHHHQEVILVQTREEVVGGDDSDGLRAEDGFEDQILIPVPAPAGGDDDYIEQTLVTVAAAGKSGGGSSSGGGRVKKGGGKKSGKKSYLGSGAGAAGGGGADPGNKKWEQKQVQIKTLEGEFSVTMWSSDEKKDIDHETVVEEQIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKIKEDDAPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ

Computationally mapped potential isoform sequences

There is 1 potential isoform mapped to this entry

View all
EntryEntry nameGene nameLength
A0A8I6A7Q7A0A8I6A7Q7_RATYy1403

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias39-55Acidic residues
Compositional bias66-80Basic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AY442180
EMBL· GenBank· DDBJ
AAR14688.1
EMBL· GenBank· DDBJ
Genomic DNA
AB080317
EMBL· GenBank· DDBJ
BAC53761.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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