Q7XPM8 · TIF3_ORYSJ
- ProteinProtein TIFY 3
- GeneTIFY3
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids216 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score5/5
Function
function
Repressor of jasmonate responses negatively regulated by the proteasome in an SCF(COI1) E3 ubiquitin-protein ligase complex-dependent manner. Involved in jasmonate (JA) signaling pathway during spikelet development. Targets directly the transcription activator MYC2 and suppresses the activity of MYC2 in triggering the transcription of MADS1 (PubMed:24647160).
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Aspect | Term | |
---|---|---|
Cellular Component | nucleus | |
Biological Process | floral meristem determinacy | |
Biological Process | floral organ formation | |
Biological Process | regulation of defense response | |
Biological Process | regulation of jasmonic acid mediated signaling pathway | |
Biological Process | response to wounding |
Keywords
- Biological process
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameProtein TIFY 3
- Short namesOsTIFY3
- Alternative names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa
Accessions
- Primary accessionQ7XPM8
- Secondary accessions
Proteomes
Genome annotation databases
Subcellular Location
Phenotypes & Variants
Features
Showing features for mutagenesis.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Mutagenesis | 172 | In eg2-1D; increased root length, extra glume-like structures and altered floral organ numbers and identities. | ||||
Sequence: A → G |
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000434839 | 1-216 | Protein TIFY 3 | |||
Sequence: MDLLEKKNIKKGGEVEEEVARKGEERKEEEVVVEEKSHQQQQQQGEEELVGLSLAGGRPKVFPMSSPPPNPSQLTIFYGGSVCVYDSVPPEKAQAIMLIAAAAAAAASATKSNAAIAVKPPVMPAANATQAAVSPVLTRSLSLQSTSVATGQPQVAADPSSICKLQADLPIARRHSLQRFLEKRRDRLVSKAPYPTKSSEGMEASGMEVTAEGKAQ |
Post-translational modification
Ubiquitinated (Probable). Increase in jasmonoyl isoleucine (JA-Ile) levels mediates its degradation via COI1B-mediated proteasome pathway (PubMed:24647160).
Keywords
- PTM
Proteomic databases
Expression
Tissue specificity
Expressed in roots, stems, leaves, spikelets and seeds.
Induction
Structure
Family & Domains
Features
Showing features for compositional bias, region, domain, motif.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-42 | Basic and acidic residues | ||||
Sequence: MDLLEKKNIKKGGEVEEEVARKGEERKEEEVVVEEKSHQQQQ | ||||||
Region | 1-47 | Disordered | ||||
Sequence: MDLLEKKNIKKGGEVEEEVARKGEERKEEEVVVEEKSHQQQQQQGEE | ||||||
Domain | 67-102 | Tify | ||||
Sequence: PPPNPSQLTIFYGGSVCVYDSVPPEKAQAIMLIAAA | ||||||
Motif | 170-194 | Jas | ||||
Sequence: PIARRHSLQRFLEKRRDRLVSKAPY | ||||||
Motif | 172-179 | Nuclear localization signal | ||||
Sequence: ARRHSLQR | ||||||
Region | 184-216 | Disordered | ||||
Sequence: RRDRLVSKAPYPTKSSEGMEASGMEVTAEGKAQ |
Domain
The jas domain (170-194) is required for interaction with COI1.
Sequence similarities
Belongs to the TIFY/JAZ family.
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length216
- Mass (Da)22,931
- Last updated2003-10-01 v1
- Checksum32BFC280FF28AE9F
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A0N7KJU4 | A0A0N7KJU4_ORYSJ | Os04g0653000 | 196 |
Sequence caution
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-42 | Basic and acidic residues | ||||
Sequence: MDLLEKKNIKKGGEVEEEVARKGEERKEEEVVVEEKSHQQQQ |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AL606690 EMBL· GenBank· DDBJ | CAE03550.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AP008210 EMBL· GenBank· DDBJ | BAF16017.1 EMBL· GenBank· DDBJ | Genomic DNA | Different initiation | |
AP014960 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
CM000141 EMBL· GenBank· DDBJ | EAZ32236.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AK059441 EMBL· GenBank· DDBJ | BAG86993.1 EMBL· GenBank· DDBJ | mRNA | Different initiation | |
AK059441 EMBL· GenBank· DDBJ | BAG86994.1 EMBL· GenBank· DDBJ | mRNA | Different initiation | |
AK069326 EMBL· GenBank· DDBJ | BAG91378.1 EMBL· GenBank· DDBJ | mRNA | Different initiation | |
AK069326 EMBL· GenBank· DDBJ | BAG91379.1 EMBL· GenBank· DDBJ | mRNA | Different initiation |