Q7VRR4 · GLYA_BLOFL

  • Protein
    Serine hydroxymethyltransferase
  • Gene
    glyA
  • Status
    UniProtKB reviewed (Swiss-Prot)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    4/5

Function

function

Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.

Catalytic activity

Cofactor

pyridoxal 5'-phosphate (UniProtKB | Rhea| CHEBI:597326 )

Pathway

One-carbon metabolism; tetrahydrofolate interconversion.
Amino-acid biosynthesis; glycine biosynthesis; glycine from L-serine: step 1/1.

Features

Showing features for binding site, site.

TypeIDPosition(s)Description
Binding site118(6S)-5,6,7,8-tetrahydrofolate (UniProtKB | ChEBI)
Binding site122-124(6S)-5,6,7,8-tetrahydrofolate (UniProtKB | ChEBI)
Site225Plays an important role in substrate specificity
Binding site353-355(6S)-5,6,7,8-tetrahydrofolate (UniProtKB | ChEBI)

GO annotations

AspectTerm
Cellular Componentcytosol
Molecular Functioncobalt ion binding
Molecular Functionglycine hydroxymethyltransferase activity
Molecular Functionpyridoxal phosphate binding
Molecular Functionserine binding
Molecular Functionzinc ion binding
Biological Processfolic acid metabolic process
Biological Processglycine biosynthetic process from serine
Biological ProcessL-serine catabolic process
Biological Processtetrahydrofolate interconversion

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Serine hydroxymethyltransferase
  • EC number
  • Short names
    SHMT
    ; Serine methylase

Gene names

    • Name
      glyA
    • Ordered locus names
      Bfl536

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Bacteria > Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > ant endosymbionts > Candidatus Blochmanniella

Accessions

  • Primary accession
    Q7VRR4

Proteomes

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for chain, modified residue.

TypeIDPosition(s)Description
ChainPRO_00001135561-414Serine hydroxymethyltransferase
Modified residue226N6-(pyridoxal phosphate)lysine

Interaction

Subunit

Homodimer.

Protein-protein interaction databases

Structure

Family & Domains

Sequence similarities

Belongs to the SHMT family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    414
  • Mass (Da)
    46,428
  • Last updated
    2003-10-01 v1
  • Checksum
    768FC655406F8BAA
MVYDIMDYDIELWDIVKKEINRQERHIDLVASENYISIQAMKAQGSQLTNKYAEGYPGKRYYGGCKYVDLIEQLAIDRAKVLFTAEYVNVQPHSGSQANFSVFNALLDPGDTILGMHLYHGGHLTHGSKVNFSGKLYKTIFYGVDKFGCIDYEQLCFLTERYRPKMIIGGFSAYSGIVDWARMRRIADSVGAYFFVDMAHIAGLVAAGVYPNPIPYAHVVTATTHKTLAGPRGGIILSNGDNDIEFYRKLDASVFPGSQGGPLMHVIAAKAVAFKEAMHVDFKRYQKQVIINSQKMAKEFLNNGFTVVSGIPYNHLFILDLTNHYITGKDASLVLERANIIVNKNCIPNDSHSPFITSGIRIGTAAVTRRGFNDNDVQEVARWICNILNDISNEKIILNAKKNVLDICYRHPVY

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
BX248583
EMBL· GenBank· DDBJ
CAD83222.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

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