Q7KSA0 · Q7KSA0_DROME

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytoplasm
Cellular Componentnucleus
Cellular Componentpostsynapse of neuromuscular junction
Cellular Componentprecatalytic spliceosome
Cellular Componentribonucleoprotein complex
Cellular Componentribonucleoprotein granule
Molecular FunctionmRNA binding
Biological Processdorsal appendage formation
Biological ProcessmRNA splicing, via spliceosome
Biological Processnegative regulation of synaptic assembly at neuromuscular junction
Biological Processoocyte dorsal/ventral axis specification
Biological Processregulation of neuromuscular synaptic transmission
Biological Processregulation of oskar mRNA translation

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Syncrip, isoform B
    • Syncrip, isoform L

Gene names

    • Name
      Syp
    • Synonyms
      AI945337
      , anon-WO0118547.613
      , cg17838
      , Dmel\CG17838
      , l(3)03806
      , syp
    • ORF names
      CG17838
      , Dmel_CG17838

Organism names

  • Taxonomic identifier
  • Strain
    • Berkeley
  • Taxonomic lineage
    Eukaryota > Metazoa > Ecdysozoa > Arthropoda > Hexapoda > Insecta > Pterygota > Neoptera > Endopterygota > Diptera > Brachycera > Muscomorpha > Ephydroidea > Drosophilidae > Drosophila > Sophophora

Accessions

  • Primary accession
    Q7KSA0
  • Secondary accessions
    • A8JR56

Proteomes

Organism-specific databases

PTM/Processing

Proteomic databases

Expression

Gene expression databases

    • FBgn0038826Expressed in mechanosensory neuron (Drosophila) in haltere and 294 other cell types or tissues

Family & Domains

Features

Showing features for region, compositional bias, domain.

TypeIDPosition(s)Description
Region1-26Disordered
Compositional bias10-26Basic and acidic residues
Domain164-243RRM
Domain245-327RRM
Domain340-410RRM
Region521-578Disordered
Compositional bias533-562Polar residues
Region620-644Disordered
Region656-677Disordered

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    711
  • Mass (Da)
    77,555
  • Last updated
    2007-12-04 v1
  • Checksum
    D6F7797365DCC3D6
MAEGNGELLDDINQKADDRGDGERTEDYPKLLEYGLDKKVAGKLDEIYKTGKLAHAELDERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRASQQGVAAPATVKGPDEDKIKKILERTGYTLDVTTGQRKYGGPPPHWEGNVPGNGCEVFCGKIPKDMYEDELIPLFENCGIIWDLRLMMDPMTGTNRGYAFVTFTNREAAVNAVRQLDNHEIKPGKCLKINISVPNLRLFVGNIPKSKGKDEILEEFGKLTAGLYEVIIYSSPDDKKKNRGFCFLEYESHKAASLAKRRLGTGRIKVWGCDIIVDWADPQEEPDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVERVKKIKDYAFIHFEDRDSAVEAMRGLNGKEIGASNIEVSLAKPPSDKKKKEEILRARERRMMQMMQARPGIVGNLSPTHPSIMSLTPMRPGARMPLRTPIPREYDYFYDFFGFSDYRQGGSFGNNVSYYDDMYRWIDGDYNYYDYPNGGGGGSGGGGGSVSGGTVLPLSAGGSQNSPMASGQRSARGSASGPSASPSLMGVGRGHGITVPRGRVVGQRGSISRLGAQTVPQAAGAAAAAGQAAAAVAQRGATGQGAPAATGGFRGVLPTRPSARGTQHVKPLQNLPVVGKRKFDGGHQNPADVKRRYPSGLIGNGGSWGSLPLPQQPLGTNGEQWYMDTFSAWS

Computationally mapped potential isoform sequences

There are 17 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
A0A0B4KHI4A0A0B4KHI4_DROMESyp761
Q8IN48Q8IN48_DROMESyp571
Q8IN47Q8IN47_DROMESyp563
A0A0B4KGF9A0A0B4KGF9_DROMESyp665
A0A0B4KGK5A0A0B4KGK5_DROMESyp699
A0A0B4KGK8A0A0B4KGK8_DROMESyp569
A0A0B4KH21A0A0B4KH21_DROMESyp603
A0A0B4KH24A0A0B4KH24_DROMESyp611
A0A0B4KHH8A0A0B4KHH8_DROMESyp753
A0A0B4KHT5A0A0B4KHT5_DROMESyp761
A4V364A4V364_DROMESyp529
Q9VDI8Q9VDI8_DROMESyp707
Q95TW4Q95TW4_DROMESyp529
A8JR54A8JR54_DROMESyp534
A0A4D6K4U6A0A4D6K4U6_DROMESyp699
A0A4D6K1Z7A0A4D6K1Z7_DROMESyp670
A0A4D6K3P4A0A4D6K3P4_DROMESyp678

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias10-26Basic and acidic residues
Compositional bias533-562Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AE014297
EMBL· GenBank· DDBJ
AAN13835.2
EMBL· GenBank· DDBJ
Genomic DNA
AE014297
EMBL· GenBank· DDBJ
ABW08710.2
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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