Q7F974 · Q7F974_ORYSJ
- ProteinRNA-directed DNA polymerase
- GeneOSJNBa0001M07.5
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids1471 (go to sequence)
- Protein existencePredicted
- Annotation score2/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Molecular Function | nucleic acid binding | |
Molecular Function | zinc ion binding | |
Biological Process | DNA integration |
Keywords
- Molecular function
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameRNA-directed DNA polymerase
- EC number
Gene names
Organism names
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa
Accessions
- Primary accessionQ7F974
Structure
Family & Domains
Features
Showing features for compositional bias, region, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-32 | Polar residues | ||||
Sequence: METRNGSRDSNNASGSEEPINGARANGASDNS | ||||||
Region | 1-65 | Disordered | ||||
Sequence: METRNGSRDSNNASGSEEPINGARANGASDNSPSPPPENPTIAQVQQQAQQQQQNLQFGPPPPQS | ||||||
Compositional bias | 41-61 | Polar residues | ||||
Sequence: TIAQVQQQAQQQQQNLQFGPP | ||||||
Region | 248-282 | Disordered | ||||
Sequence: HRPYHPGSFNKNHHSGSHNNSEQHSLNPTPSSLKI | ||||||
Compositional bias | 257-282 | Polar residues | ||||
Sequence: NKNHHSGSHNNSEQHSLNPTPSSLKI | ||||||
Domain | 305-320 | CCHC-type | ||||
Sequence: CFNCNKPGHTVGKCPK | ||||||
Domain | 558-737 | Reverse transcriptase | ||||
Sequence: LQKGYIRPSTSPWGAPVIFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIREEDIPKTAFITRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSKSEEEHEQHLRLVLEKLKEHQLYAKFSKCDFWLKEVQFLGHIV | ||||||
Domain | 1102-1265 | Integrase catalytic | ||||
Sequence: PLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPVHTTYSGKKLAELYLARIMCLHGVPKKIVSDRGSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGAWDKSLPYAEFSYNNSYQASLQMAPFEALYGRR |
Keywords
- Domain
Family and domain databases
Sequence
- Sequence statusComplete
- Length1,471
- Mass (Da)168,451
- Last updated2004-07-05 v1
- Checksum7536B406A472C86D
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-32 | Polar residues | ||||
Sequence: METRNGSRDSNNASGSEEPINGARANGASDNS | ||||||
Compositional bias | 41-61 | Polar residues | ||||
Sequence: TIAQVQQQAQQQQQNLQFGPP | ||||||
Compositional bias | 257-282 | Polar residues | ||||
Sequence: NKNHHSGSHNNSEQHSLNPTPSSLKI |