Q7F4T1 · Q7F4T1_ORYSJ

Function

function

Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H2O, generating O2 and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbD) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex.

Miscellaneous

2 of the reaction center chlorophylls (ChlD1 and ChlD2) are entirely coordinated by water.

Catalytic activity

Features

Showing features for binding site.

135350100150200250300350
TypeIDPosition(s)Description
Binding site118Mg (UniProtKB | ChEBI) of chlorophyll a ChlzD2 (UniProtKB | ChEBI); axial binding residue
Binding site130pheophytin a D2 (UniProtKB | ChEBI)
Binding site143pheophytin a D2 (UniProtKB | ChEBI)
Binding site198Mg (UniProtKB | ChEBI) of chlorophyll a PD2 (UniProtKB | ChEBI); axial binding residue
Binding site215Fe cation (UniProtKB | ChEBI); ligand shared with heterodimeric partner
Binding site215a plastoquinone Q(A) (UniProtKB | ChEBI)
Binding site262a plastoquinone Q(A) (UniProtKB | ChEBI)
Binding site269Fe cation (UniProtKB | ChEBI); ligand shared with heterodimeric partner

GO annotations

AspectTerm
Cellular Componentchloroplast thylakoid membrane
Cellular Componentphotosystem II
Molecular Functionchlorophyll binding
Molecular Functionelectron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
Molecular Functioniron ion binding
Molecular Functionoxygen evolving activity
Biological Processphotosynthetic electron transport in photosystem II

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Photosystem II D2 protein
  • EC number
  • Short names
    PSII D2 protein
  • Alternative names
    • Photosystem Q(A) protein

Gene names

    • Name
      psbD
    • ORF names
      P0557A01.60

Encoded on

  • Chloroplast

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa

Accessions

  • Primary accession
    Q7F4T1
  • Secondary accessions
    • A0A0K0LQS9

Proteomes

Genome annotation databases

Subcellular Location

Membrane
; Multi-pass membrane protein
Plastid, chloroplast thylakoid membrane
; Multi-pass membrane protein

Features

Showing features for transmembrane.

TypeIDPosition(s)Description
Transmembrane28-50Helical
Transmembrane111-129Helical
Transmembrane141-161Helical
Transmembrane167-185Helical
Transmembrane197-217Helical
Transmembrane267-292Helical

Keywords

PTM/Processing

Keywords

Interaction

Subunit

PSII is composed of 1 copy each of membrane proteins PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, PsbM, PsbT, PsbX, PsbY, PsbZ, Psb30/Ycf12, at least 3 peripheral proteins of the oxygen-evolving complex and a large number of cofactors. It forms dimeric complexes.

Structure

Family & Domains

Sequence similarities

Belongs to the reaction center PufL/M/PsbA/D family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    353
  • Mass (Da)
    39,573
  • Last updated
    2004-07-05 v1
  • Checksum
    241372989BAE045B
MTIALGRVTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFALIGFMLRQFELARSVQLRPYNAISFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
KM088016
EMBL· GenBank· DDBJ
AJC99298.1
EMBL· GenBank· DDBJ
Genomic DNA
KM088017
EMBL· GenBank· DDBJ
AJC99387.1
EMBL· GenBank· DDBJ
Genomic DNA
AP003280
EMBL· GenBank· DDBJ
BAB89777.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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