Q75HJ4 · GL38_ORYSJ

Function

function

May play a role in plant defense. Probably has no oxalate oxidase activity even if the active site is conserved.

Features

Showing features for binding site.

122520406080100120140160180200220
TypeIDPosition(s)Description
Binding site119Mn2+ (UniProtKB | ChEBI)
Binding site121Mn2+ (UniProtKB | ChEBI)
Binding site126Mn2+ (UniProtKB | ChEBI)
Binding site165Mn2+ (UniProtKB | ChEBI)

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentapoplast
Molecular Functionmanganese ion binding

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Germin-like protein 3-8

Gene names

    • ORF names
      OsJ_012452, OSJNBb0015I02.10
    • Ordered locus names
      Os03g0804700, LOC_Os03g59010

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Nipponbare
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa

Accessions

  • Primary accession
    Q75HJ4
  • Secondary accessions
    • A0A0P0W4E7

Proteomes

Genome annotation databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for signal, chain, disulfide bond, glycosylation.

TypeIDPosition(s)Description
Signal1-25
ChainPRO_000036550926-225Germin-like protein 3-8
Disulfide bond34↔57
Glycosylation86N-linked (GlcNAc...) asparagine

Keywords

Proteomic databases

Interaction

Subunit

Oligomer (believed to be a pentamer but probably hexamer).

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain71-219Cupin type-1

Sequence similarities

Belongs to the germin family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Sequence processing
    The displayed sequence is further processed into a mature form.
  • Length
    225
  • Mass (Da)
    23,128
  • Last updated
    2004-07-05 v1
  • Checksum
    22B1C52C35DC43C5
MSRTSSAPLLVLSAALAVLASTCIADPEPVQDFCVAVVPRAGDAAAAACPAYPGFPCKPASTVVSDDFFFAGLAVASDTDNRFGFNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSHPRATELIHVVAGRVLAGFVSTAGEFYSKVLGEGETFVVPRGMIHFQYNVGGVAAQVITAFNSQMPGVVAAGSTLFGSDPEIPDAVLAKSFQVDAKIIKLLKSKF

Sequence caution

The sequence BAF13536.2 differs from that shown. Reason: Erroneous initiation Extended N-terminus.

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AC135563
EMBL· GenBank· DDBJ
AAS07230.1
EMBL· GenBank· DDBJ
Genomic DNA
DP000009
EMBL· GenBank· DDBJ
ABF99426.1
EMBL· GenBank· DDBJ
Genomic DNA
AP008209
EMBL· GenBank· DDBJ
BAF13536.2
EMBL· GenBank· DDBJ
Genomic DNA Different initiation
AP014959
EMBL· GenBank· DDBJ
BAS86930.1
EMBL· GenBank· DDBJ
Genomic DNA
CM000140
EMBL· GenBank· DDBJ
EAZ28969.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.
FeedbackHelp