Q708F9 · Q708F9_9POTV

  • Protein
    Genome polyprotein
  • Gene
    NIb-CP
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Evidence at transcript level
  • Annotation score
    2/5

Function

function

Involved in aphid transmission, cell-to-cell and systemis movement, encapsidation of the viral RNA and in the regulation of viral RNA amplification.

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentviral capsid
Molecular Functionnucleotide binding
Molecular FunctionRNA binding
Molecular FunctionRNA-dependent RNA polymerase activity
Biological ProcessDNA-templated transcription
Biological Processviral RNA genome replication

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Genome polyprotein

Gene names

    • Name
      NIb-CP

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • CI-AT
  • Taxonomic lineage
    Viruses > Riboviria > Orthornavirae > Pisuviricota > Stelpaviricetes > Patatavirales > Potyviridae > Potyvirus > Dasheen mosaic virus

Accessions

  • Primary accession
    Q708F9

Subcellular Location

Keywords

Family & Domains

Features

Showing features for domain, compositional bias, region.

TypeIDPosition(s)Description
Domain1-60RdRp catalytic
Compositional bias212-227Polar residues
Region212-266Disordered
Compositional bias230-244Pro residues

Sequence similarities

Belongs to the potyviridae genome polyprotein family.

Family and domain databases

Sequence

  • Sequence status
    Fragment
  • Length
    502
  • Mass (Da)
    57,070
  • Last updated
    2004-07-05 v1
  • Checksum
    0DC462710D8B3144
GNNSGQPSTVVDNTLMVVISVYYSCIKQGWTEFDISQRIIFYANGDDIILAVQQEDETVLDTFQNSFAELGLNYDFSERTHRREDLWFMSHQAMKIGDVYIPKLEPERIVSILEWDRSKEIMHRTEAICAAMIEAWGHTDLLQEIRKFYLWLLEKDEFKTLASEGKAPYIAETALKKLYTDETAQKSELQRYWEAFNFETTNKFDEVTMQAGDTVDAGQNENKTKTPATRGGDPPPPLPPAPQISEAPVVRDAPPTETGKGKGIVKDVNAGTSGTYSVPRLSKITQKMNLPLVKGKCILNLNHLIEYKPEQRDIFNTRATHTQFEAWYNAVKREYELEDEQMHIVMNGFMVWCIDNGTSPDINGAWVMMDGNEQIEYPLKPIVENAKPTLRQIMHHFSDAAEAYIELRNAEKPYMPRYGLIRNLRDASLARYAFDFYEVNSKTPVRAREAVAQMKAAALSNVTTRLFGLDGNVSTSSENTERHTAKDVTPNMHTLLGMSPPQ

Features

Showing features for non-terminal residue, compositional bias.

TypeIDPosition(s)Description
Non-terminal residue1
Compositional bias212-227Polar residues
Compositional bias230-244Pro residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AJ616720
EMBL· GenBank· DDBJ
CAE83572.1
EMBL· GenBank· DDBJ
mRNA

Similar Proteins

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