Q700E3 · BH027_ARATH

Function

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA binding
Molecular FunctionDNA-binding transcription factor activity
Molecular Functionprotein dimerization activity
Biological Processregulation of DNA-templated transcription

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Transcription factor bHLH27
  • Alternative names
    • Basic helix-loop-helix protein 27 (AtbHLH27; bHLH 27)
    • Transcription factor EN 42
    • bHLH transcription factor bHLH027

Gene names

    • Name
      BHLH27
    • Synonyms
      EN42
    • ORF names
      F27B13.170
    • Ordered locus names
      At4g29930

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    Q700E3
  • Secondary accessions
    • B3H6F5
    • Q67XZ4
    • Q8GYC3

Proteomes

Organism-specific databases

Genome annotation databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00003587371-263Transcription factor bHLH27

Proteomic databases

Expression

Tissue specificity

Expressed constitutively in roots, leaves, stems, and flowers.

Gene expression databases

Interaction

Subunit

Homodimer.

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for region, compositional bias, domain.

TypeIDPosition(s)Description
Region32-61Disordered
Compositional bias34-57Polar residues
Domain50-99bHLH

Phylogenomic databases

Family and domain databases

Sequence & Isoforms

Align isoforms (4)
  • Sequence status
    Complete

This entry describes 4 isoforms produced by Alternative splicing.

Q700E3-1

This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

  • Length
    263
  • Mass (Da)
    30,280
  • Last updated
    2004-07-05 v1
  • Checksum
    C0D7FA630D6F771D
MEDLDHEYKNYWETTMFFQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVTWMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFLQVTLSLSPSLISLFGNVITSTNYKILNASREYCTCLVLV

Q700E3-2

  • Name
    2
  • See also
    sequence in UniParc or sequence clusters in UniRef
  • Differences from canonical
    • 226-263: VTLSLSPSLISLFGNVITSTNYKILNASREYCTCLVLV → ADEEESSAVEAKIQMAIAAYNDPNCLINF

Q700E3-3

  • Name
    3
  • See also
    sequence in UniParc or sequence clusters in UniRef
  • Differences from canonical
    • 124-152: Missing
    • 226-263: VTLSLSPSLISLFGNVITSTNYKILNASREYCTCLVLV → ADEEESSAVEAKIQMAIAAYNDPNCLINF

Q700E3-4

  • Name
    4
  • See also
    sequence in UniParc or sequence clusters in UniRef
  • Differences from canonical
    • 169-263: MKVTWMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFLQVTLSLSPSLISLFGNVITSTNYKILNASREYCTCLVLV → VRTMHYLAVHSKLPFF

Computationally mapped potential isoform sequences

There are 2 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
A0A1P8B6L1A0A1P8B6L1_ARATHAt4g29930228
A0A1P8B6K8A0A1P8B6K8_ARATHAt4g29930234

Features

Showing features for compositional bias, alternative sequence, sequence conflict.

TypeIDPosition(s)Description
Compositional bias34-57Polar residues
Alternative sequenceVSP_036081124-152in isoform 3
Sequence conflict139in Ref. 7; AF488569
Alternative sequenceVSP_036082169-263in isoform 4
Alternative sequenceVSP_036083226-263in isoform 2 and isoform 3

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AL161575
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.
CP002687
EMBL· GenBank· DDBJ
AEE85694.1
EMBL· GenBank· DDBJ
Genomic DNA
CP002687
EMBL· GenBank· DDBJ
AEE85695.1
EMBL· GenBank· DDBJ
Genomic DNA
CP002687
EMBL· GenBank· DDBJ
AEE85696.1
EMBL· GenBank· DDBJ
Genomic DNA
CP002687
EMBL· GenBank· DDBJ
AEE85697.1
EMBL· GenBank· DDBJ
Genomic DNA
CP002687
EMBL· GenBank· DDBJ
ANM67230.1
EMBL· GenBank· DDBJ
Genomic DNA
AK117730
EMBL· GenBank· DDBJ
BAC42379.1
EMBL· GenBank· DDBJ
mRNA
BT005869
EMBL· GenBank· DDBJ
AAO64804.1
EMBL· GenBank· DDBJ
mRNA
AY568654
EMBL· GenBank· DDBJ
AAS79544.1
EMBL· GenBank· DDBJ
mRNA
AJ630482
EMBL· GenBank· DDBJ
CAG25855.1
EMBL· GenBank· DDBJ
mRNA
AK176201
EMBL· GenBank· DDBJ
BAD43964.1
EMBL· GenBank· DDBJ
mRNA
AK176276
EMBL· GenBank· DDBJ
BAD44039.1
EMBL· GenBank· DDBJ
mRNA
AK176674
EMBL· GenBank· DDBJ
BAD44437.1
EMBL· GenBank· DDBJ
mRNA
AK222212
EMBL· GenBank· DDBJ
BAD95372.1
EMBL· GenBank· DDBJ
mRNA
AK228201
EMBL· GenBank· DDBJ
BAF00155.1
EMBL· GenBank· DDBJ
mRNA
AF488569
EMBL· GenBank· DDBJ
-mRNA No translation available.

Genome annotation databases

Similar Proteins

Disclaimer

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