Q6Z065 · Q6Z065_ORYSJ
- ProteinNuclear transcription factor Y subunit
- GeneOsHAP2A
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids193 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score2/5
Function
function
Component of the sequence-specific heterotrimeric transcription factor (NF-Y) which specifically recognizes a 5'-CCAAT-3' box motif found in the promoters of its target genes.
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | nucleus | |
Molecular Function | DNA binding | |
Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | |
Biological Process | regulation of transcription by RNA polymerase II |
Keywords
- Molecular function
- Biological process
Names & Taxonomy
Protein names
- Recommended nameNuclear transcription factor Y subunit
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa
Accessions
- Primary accessionQ6Z065
- Secondary accessions
Proteomes
Genome annotation databases
Subcellular Location
PTM/Processing
Proteomic databases
Interaction
Structure
Family & Domains
Features
Showing features for region, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 1-22 | Disordered | ||||
Sequence: MKPDGETQLRPTAAGHPDPGLG | ||||||
Region | 135-193 | Disordered | ||||
Sequence: GRFLNSKAVEGKQDTKSVDKKDGAVPSEEKRDKKLANSIIKLENSSPTTQPGADASDVV | ||||||
Compositional bias | 146-172 | Basic and acidic residues | ||||
Sequence: KQDTKSVDKKDGAVPSEEKRDKKLANS | ||||||
Compositional bias | 173-193 | Polar residues | ||||
Sequence: IIKLENSSPTTQPGADASDVV |
Sequence similarities
Belongs to the NFYA/HAP2 subunit family.
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length193
- Mass (Da)20,752
- Last updated2004-07-05 v1
- Checksum6B007578DF8C165F
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 146-172 | Basic and acidic residues | ||||
Sequence: KQDTKSVDKKDGAVPSEEKRDKKLANS | ||||||
Compositional bias | 173-193 | Polar residues | ||||
Sequence: IIKLENSSPTTQPGADASDVV |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
HQ731479 EMBL· GenBank· DDBJ | ADZ40493.1 EMBL· GenBank· DDBJ | mRNA | ||
AB288027 EMBL· GenBank· DDBJ | BAF64435.1 EMBL· GenBank· DDBJ | mRNA | ||
AK059903 EMBL· GenBank· DDBJ | BAG87204.1 EMBL· GenBank· DDBJ | mRNA | ||
AP014964 EMBL· GenBank· DDBJ | BAT04217.1 EMBL· GenBank· DDBJ | Genomic DNA |