Q6YYW1 · Q6YYW1_ORYSJ

Function

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentmembrane
Cellular Componentnucleus
Molecular FunctionDNA binding
Biological Processregulation of DNA-templated transcription

Names & Taxonomy

Protein names

  • Submitted names
    • Os08g0562200 protein
    • cDNA clone:J023030H12, full insert sequence

Gene names

    • ORF names
      OSNPB_080562200
    • Ordered locus names
      Os08g0562200

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Nipponbare
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa

Accessions

  • Primary accession
    Q6YYW1

Proteomes

Genome annotation databases

Subcellular Location

Features

Showing features for transmembrane.

TypeIDPosition(s)Description
Transmembrane561-582Helical

Keywords

Expression

Gene expression databases

Structure

Family & Domains

Features

Showing features for compositional bias, region, domain.

TypeIDPosition(s)Description
Compositional bias1-15Polar residues
Region1-23Disordered
Domain21-168NAC
Region239-260Disordered

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    618
  • Mass (Da)
    68,468
  • Last updated
    2004-07-05 v1
  • Checksum
    13BFC035FD0DED05
MSHPSSSSSSAPPAAAEATSLAPGFRFHPTDEELVSYYLKRKVHGRPLKVDAIAEVDLYKVEPWDLPARSRLRSRDSQWYFFSRLDRKHANRARTNRATAGGYWKTTGKDREVRNGPTTVGMKKTLVFHAGRAPKGERTNWVMHEYRLDGQTTIPPQDSFVVCRIFQKAGPGPQNGAQYGAPFVEEEWEEDDEDVGLLPVEEKDNSDDQEKEISGAMEKGYLQMSDLVQNLVDQNENGTIALPVSDNSNNSNHSEDVDGNSGDILSDQNLGSNFLHHVEPVEQNGLVLNENMFSSANAGDLFNISSPNDGFLELKDFADIADLENPLANESTIWPSDGWPWKSTDSMEAVNGASNEFSPLAGEQIFQPEELEQLLQSLQEDSHMGSTISDPPHSSITNLAKPEEDCLMFYDAPFDSSMCDDGFRQLNGFLGSPSTNLSGIDMVDDGMPYYDAMDDNLFNDLLSSVQPSAGSSSHAFSGPVLTQEVNNSTYTYSPTQKVLEPNFVVGAPSSARLPEAGSQLNYVVLPGNITMEKYHRSIIISCSLVLIHHGKRAFSALFGPLIINLFFFAMRNCSLLYLLVLIEQDLSITRSFLWRHSYLAQSVQCYTQLACDFSLPGH

Computationally mapped potential isoform sequences

There is 1 potential isoform mapped to this entry

View all
EntryEntry nameGene nameLength
Q6YYW2Q6YYW2_ORYSJNAC40656

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias1-15Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AK069733
EMBL· GenBank· DDBJ
BAG91576.1
EMBL· GenBank· DDBJ
mRNA
AP014964
EMBL· GenBank· DDBJ
BAT06715.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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