Q6WNT0 · Q6WNT0_TAKRU

Function

Features

Showing features for dna binding.

146150100150200250300350400450
TypeIDPosition(s)Description
DNA binding91-159HMG box

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specific
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA binding
Biological Processmorphogenesis of an epithelium
Biological Processnegative regulation of transcription by RNA polymerase II
Biological Processneural crest cell development

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Transcription factor Sox8b

Gene names

    • Name
      Sox8b

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Neoteleostei > Acanthomorphata > Eupercaria > Tetraodontiformes > Tetradontoidea > Tetraodontidae > Takifugu

Accessions

  • Primary accession
    Q6WNT0

Subcellular Location

Keywords

  • Cellular component

Family & Domains

Features

Showing features for region, compositional bias, domain.

Type
IDPosition(s)Description
Region1-52Disordered
Compositional bias10-28Polar residues
Domain91-159HMG box
Region163-188Disordered
Region207-252Disordered
Region321-398Disordered
Compositional bias340-354Basic and acidic residues
Compositional bias377-398Polar residues
Region442-461Disordered

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    461
  • Mass (Da)
    50,452
  • Last updated
    2004-07-05 v1
  • Checksum
    1305FC61E64606A6
MKEDCHSLTYSPPSPGTKASMSQSASDSEFPNDKDKSDSAGVITQRSPSSAEDRFPVCIRDAVSQVLKGYDWSLVAVSAPGERGLKNKPHVKRPMNAFMVWAQAARKKLADQYPHLHNAELSKTLGKLWRLLTETEKRPFIEEADRLRMQHKKTYPDYKYQPRRRKVTKVGEGDCRPGSTQQQDGLCKTETTMKLPSAGEVHSYYHQDRAGQSNGPPTPPSTPKPDVHMGTTREVHRPSDGGSIPPTSRQNIDFSNVDISDLSTDVIGTIDGFDVHEFDQYLTPNSHGSTALPPSDTGHGYLNPPGAFILPNIHSHSIPTWTRKSPALTGMPSCDKPTLSEDTTTRKPLVKTEQMSPDHHSGSCTSPPPPLQPQCTPGSSVCPSSASSPSSTRPPDYSDLQSSSFFSAISGYVPPLYQHPYFHPSCVSYATPLINSLALAPPSHSPPSGWEQPIYTTLTKP

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias10-28Polar residues
Compositional bias340-354Basic and acidic residues
Compositional bias377-398Polar residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AY277963
EMBL· GenBank· DDBJ
AAQ18506.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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