Q6WNS6 · Q6WNS6_TAKRU

Function

Features

Showing features for dna binding.

149550100150200250300350400450
TypeIDPosition(s)Description
DNA binding106-174HMG box

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specific
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA binding
Biological Processenteric nervous system development
Biological Processmorphogenesis of an epithelium
Biological Processnegative regulation of transcription by RNA polymerase II
Biological Processneural crest cell migration
Biological Processperipheral nervous system development

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Transcription factor SOX-10

Gene names

    • Name
      Sox10b

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Neoteleostei > Acanthomorphata > Eupercaria > Tetraodontiformes > Tetradontoidea > Tetraodontidae > Takifugu

Accessions

  • Primary accession
    Q6WNS6

Subcellular Location

Cytoplasm
Nucleus

Keywords

  • Cellular component

Family & Domains

Features

Showing features for region, compositional bias, domain.

Type
IDPosition(s)Description
Region1-68Disordered
Compositional bias7-40Polar residues
Domain106-174HMG box
Compositional bias158-179Basic and acidic residues
Region158-293Disordered
Compositional bias264-278Polar residues
Region474-495Disordered

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    495
  • Mass (Da)
    52,654
  • Last updated
    2004-07-05 v1
  • Checksum
    1E5998BE3A43E6C4
MSREEQSFSEADLSPGMSDDSRSLSPGHSSGATGGGDSPLLGSQQPHLAGMDNTTASCSSAKSDDEDERFPVEIRDAVSQVLNCYDWTIVPMPVRVNSGSKNKPHVKRPMNAFMVWAQAARRKLADQHPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRKQHKKDYPDYKYQPRRRKNGKPGSGSGSEADGHSEGEISHSQSHYKGFHLDVVHSGGAGSPLADGHHPHAAGQSHSPPTPPTTPKTEPQSGKVGDGKREGSTNGGSRSTVEGEGSSVAPGSGKPHIDFGNVDIGEMSHEVMVNMEPFDVNEFDQYLPPNGHPGVGQTAGAAAAVAGNPASYTYGISSALAAASGHSAAWLSKQQQHQHHGTPLGSDASKAQIKSEAGGTGGHFAESASAGAHVTYTPLSLPHYSSAFPSFASRAQFADYADHQASGSYYAHSSQASGLYSAFSYMGPSQRPLYTAITDPANVPQSHSPTHWEQPVYTTLSRP

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias7-40Polar residues
Compositional bias158-179Basic and acidic residues
Compositional bias264-278Polar residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AY277967
EMBL· GenBank· DDBJ
AAQ18510.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

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