Q6NXN1 · SZRD1_MOUSE

  • Protein
    SUZ RNA-binding domain-containing
  • Gene
    Szrd1
  • Status
    UniProtKB reviewed (Swiss-Prot)
  • Amino acids
  • Protein existence
    Evidence at protein level
  • Annotation score
    2/5

Function

Names & Taxonomy

Protein names

  • Recommended name
    SUZ RNA-binding domain-containing
  • Short names
    SUZ domain-containing protein 1

Gene names

    • Name
      Szrd1
    • Synonyms
      D4Ertd22e

Organism names

  • Taxonomic identifier
  • Strains
    • C57BL/6J
    • NOD
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Glires > Rodentia > Myomorpha > Muroidea > Muridae > Murinae > Mus > Mus

Accessions

  • Primary accession
    Q6NXN1
  • Secondary accessions
    • Q3TB72
    • Q8BT36

Proteomes

Organism-specific databases

PTM/Processing

Features

Showing features for modified residue, chain.

TypeIDPosition(s)Description
Modified residue1N-acetylmethionine
ChainPRO_00003030691-152SUZ RNA-binding domain-containing
Modified residue37Phosphoserine
Modified residue39Phosphoserine
Modified residue51Phosphoserine
Modified residue105Phosphoserine
Modified residue107Phosphoserine

Keywords

Proteomic databases

PTM databases

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Miscellaneous

Family & Domains

Features

Showing features for region, domain, compositional bias.

TypeIDPosition(s)Description
Region30-152Disordered
Domain42-107SUZ
Compositional bias66-84Polar residues
Compositional bias92-125Basic and acidic residues
Domain111-152SUZ-C
Compositional bias126-140Polar residues

Sequence similarities

Belongs to the SZRD1 family.

Phylogenomic databases

Family and domain databases

Sequence & Isoform

Align isoforms (2)
  • Sequence status
    Complete

This entry describes 2 isoforms produced by Alternative splicing.

Q6NXN1-1

This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

  • Length
    152
  • Mass (Da)
    16,998
  • Last updated
    2004-07-05 v1
  • Checksum
    3EF639D6A97DE6B1
MEDEEVAESWEEAADSGEIDRRLEKKLKITQKESRKSKSPPKVPIVIQDDSLPTGPPPQIRILKRPTSNGVVSSPNSTSRPALPVKSLAQREAEYAEARRRILGSASPEEEQEKPILDRPTRISQPEDSRQPSNVIRQPLGPDGSQGFKQRR

Q6NXN1-2

  • Name
    2
  • See also
    sequence in UniParc or sequence clusters in UniRef
  • Differences from canonical
    • 1-34: MEDEEVAESWEEAADSGEIDRRLEKKLKITQKES → MRRSLRAGRRRQTAG

Computationally mapped potential isoform sequences

There is 1 potential isoform mapped to this entry

View all
EntryEntry nameGene nameLength
A2AA85A2AA85_MOUSESzrd1146

Features

Showing features for alternative sequence, compositional bias, sequence conflict.

TypeIDPosition(s)Description
Alternative sequenceVSP_0279981-34in isoform 2
Compositional bias66-84Polar residues
Compositional bias92-125Basic and acidic residues
Sequence conflict124in Ref. 1; BAE42442
Compositional bias126-140Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AK027934
EMBL· GenBank· DDBJ
BAC25672.1
EMBL· GenBank· DDBJ
mRNA
AK145912
EMBL· GenBank· DDBJ
BAE26745.1
EMBL· GenBank· DDBJ
mRNA
AK171420
EMBL· GenBank· DDBJ
BAE42442.1
EMBL· GenBank· DDBJ
mRNA
AK171702
EMBL· GenBank· DDBJ
BAE42618.1
EMBL· GenBank· DDBJ
mRNA
AL645625
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.
BC066992
EMBL· GenBank· DDBJ
AAH66992.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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