Q6H6V4 · ARFF_ORYSJ

Function

function

Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).

Features

Showing features for dna binding.

1908100200300400500600700800900
TypeIDPosition(s)Description
DNA binding134-236TF-B3

GO annotations

AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA binding
Biological Processauxin-activated signaling pathway
Biological Processregulation of DNA-templated transcription

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Auxin response factor 6
  • Alternative names
    • OsARF6a

Gene names

    • Name
      ARF6
    • Synonyms
      ARF6A
    • ORF names
      OJ1661_C12.26, OsJ_005343, OSJNBa0023I17.9
    • Ordered locus names
      Os02g0164900, LOC_Os02g06910

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Nipponbare
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa

Accessions

  • Primary accession
    Q6H6V4
  • Secondary accessions
    • A0A0P0VF46
    • B7EI38
    • Q8S981

Proteomes

Genome annotation databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for chain, modified residue (large scale data).

Type
IDPosition(s)Source
Description
ChainPRO_00002992601-908UniProtAuxin response factor 6
Modified residue (large scale data)16PTMeXchangePhosphoserine

Proteomic databases

Expression

Tissue specificity

Expressed in roots, culms, leaves and young panicles.

Interaction

Subunit

Homodimers and heterodimers.

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for region, domain.

Type
IDPosition(s)Description
Region1-21Disordered
Region525-556Disordered
Domain777-861PB1

Domain

Interactions between auxin response factors (ARFs) and Aux/IAA proteins occur through their C-terminal dimerization domains III and IV.

Sequence similarities

Belongs to the ARF family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    908
  • Mass (Da)
    100,847
  • Last updated
    2004-07-19 v1
  • Checksum
    581072770ED932C3
MKLSPSAGGVSDQPPSPPEVAEEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPTGLPSLYGGKEDDLASSLMWLRDSQNTGFQSLNFGGLGMSPWMQPRLDSSLLGLQPDMYQTIAAAAALQNTTKQVSPAMLQFQQPQNIVGRSSLLSSQILQQAQPQFQQMYHQNINGNSIQGHSQPEYLQQPLQHCQSFNEQKPQLQPQQQQQESHQQQPQHQQMQQQKHLSNFQTVPNALSVFSQLSSTPQSTPSTLQTVSPFSQQHNFPDTNISCLSPSNVSSMHDTLRSFPSEAASDLPGVPRITPVPVSDPWSSKRVAVESTITSRPHDISSQIENFDLTPSSIPQNSTLAPLPGRECLVDQDGSSDPQNHFLFGVNIDSQSLLMQDGIPSLHNENSSSTIPYSTSNFLSPSQDDYPLSQTLTTPGCLDESGYVPCSDNADQVKRPHATFVKVYKSGTVGRLLDITRFSSYHELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQEFVNSVSCIKILSPQEVQQMGKPGIELFSTSARRLGNSCDNYMSRQESRSLSTGIASVGSVEF

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AP004093
EMBL· GenBank· DDBJ
BAD25169.1
EMBL· GenBank· DDBJ
Genomic DNA
AP004863
EMBL· GenBank· DDBJ
BAD25545.1
EMBL· GenBank· DDBJ
Genomic DNA
AP008208
EMBL· GenBank· DDBJ
BAF07907.1
EMBL· GenBank· DDBJ
Genomic DNA
AP014958
EMBL· GenBank· DDBJ
BAS77143.1
EMBL· GenBank· DDBJ
Genomic DNA
CM000139
EMBL· GenBank· DDBJ
EAZ21860.1
EMBL· GenBank· DDBJ
Genomic DNA
AK070569
EMBL· GenBank· DDBJ
BAG92035.1
EMBL· GenBank· DDBJ
mRNA
AB071294
EMBL· GenBank· DDBJ
BAB85914.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

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