Q6F4N6 · Q6F4N6_ORYSJ

Function

Catalytic activity

Cofactor

pyruvate (UniProtKB | Rhea| CHEBI:15361 )

Note: Binds 1 pyruvoyl group covalently per subunit.

Pathway

Amine and polyamine biosynthesis; S-adenosylmethioninamine biosynthesis; S-adenosylmethioninamine from S-adenosyl-L-methionine: step 1/1.

Features

Showing features for binding site, site, active site.

139250100150200250300350
Type
IDPosition(s)Description
Binding site19substrate
Binding site79substrate
Site79-80Cleavage (non-hydrolytic); by autolysis
Active site80Schiff-base intermediate with substrate; via pyruvic acid
Active site94Proton donor; for catalytic activity
Binding site239substrate
Active site245Proton acceptor; for processing activity
Active site258Proton acceptor; for processing activity
Binding site262substrate

GO annotations

AspectTerm
Cellular Componentcytosol
Molecular Functionadenosylmethionine decarboxylase activity
Biological Processspermidine biosynthetic process
Biological Processspermine biosynthetic process

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    S-adenosylmethionine decarboxylase proenzyme
  • EC number

Gene names

    • Name
      SAMDC1
    • ORF names
      OSNPB_090424300
    • Ordered locus names
      Os09g0424300

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Nipponbare
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa

Accessions

  • Primary accession
    Q6F4N6
  • Secondary accessions
    • Q69QJ0

Proteomes

Genome annotation databases

Subcellular Location

PTM/Processing

Features

Showing features for chain, modified residue.

Type
IDPosition(s)Description
ChainPRO_50139904841-79S-adenosylmethionine decarboxylase beta chain
Modified residue80Pyruvic acid (Ser); by autocatalysis
ChainPRO_501399048580-392S-adenosylmethionine decarboxylase alpha chain

Keywords

Proteomic databases

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Sequence similarities

Belongs to the eukaryotic AdoMetDC family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    392
  • Mass (Da)
    42,718
  • Last updated
    2004-08-16 v1
  • Checksum
    0DF1F61522C38FE3
MSMSLADSWGSAPASPIGFEGYEKRLEITLSDAPVFVDPCGRGLRALSREQIDSFLDLAKCTIVSHLSNKHFDSYVLSESSLFVYPHKVVLKTCGTTKLLLSIPRILELAAELSLPVLSVKYSRGMFIFPGAQPSPHRSFLEEVSVLNSFFGGLKSGGNAYVIGDAFKPKKKWHVYYATEEPEQPMVTLEMCMTGLDAKKAEVFFKDSTDGSCSSAKEMTMFSGISEIIPEMEICDFEFDPCGYSMNGIYGPAVSTIHVTPEEGFSYASYEAMNFNPSSLVYDDLIKKVLACFCPSDFSVAVTIFGGHGFAKSWAKGAEVDSYMCDDLVEQELPGGGVLMYQSFTAVTPGAVSPRSTLDGWNSDGAEMVAKSKEMSVCWEGEKAAKKKDADA

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AB122089
EMBL· GenBank· DDBJ
BAD26704.1
EMBL· GenBank· DDBJ
Genomic DNA
AK067682
EMBL· GenBank· DDBJ
BAG90538.1
EMBL· GenBank· DDBJ
mRNA
AK101535
EMBL· GenBank· DDBJ
BAG95110.1
EMBL· GenBank· DDBJ
mRNA
AK102445
EMBL· GenBank· DDBJ
BAG95558.1
EMBL· GenBank· DDBJ
mRNA
AP014965
EMBL· GenBank· DDBJ
BAT08153.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

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