Q6CZT4 · PLY1_PECAS
- ProteinPectate lyase 1
- Genepel1
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids374 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score4/5
Function
function
Involved in maceration and soft-rotting of plant tissue.
Catalytic activity
Cofactor
Note: Binds 1 Ca2+ ion per subunit.
Pathway
Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-gluconate from pectin: step 2/5.
Features
Showing features for binding site, active site.
GO annotations
Aspect | Term | |
---|---|---|
Cellular Component | extracellular region | |
Molecular Function | metal ion binding | |
Molecular Function | pectate lyase activity | |
Biological Process | pectin catabolic process |
Keywords
- Molecular function
- Ligand
Enzyme and pathway databases
Protein family/group databases
Names & Taxonomy
Protein names
- Recommended namePectate lyase 1
- EC number
- Alternative names
Gene names
Organism names
- Strains
- Taxonomic lineageBacteria > Pseudomonadota > Gammaproteobacteria > Enterobacterales > Pectobacteriaceae > Pectobacterium
Accessions
- Primary accessionQ6CZT4
- Secondary accessions
Proteomes
Subcellular Location
PTM/Processing
Features
Showing features for signal, chain, disulfide bond.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Signal | 1-22 | |||||
Sequence: MKYLLPSAAAGLLLLAAQPTMA | ||||||
Chain | PRO_0000234448 | 23-374 | Pectate lyase 1 | |||
Sequence: ANTGGYATTDGGDVSGAVKKTARSLQEIVDIIEAAKKDSSGKVVKGGAFPLVITYNGNEDALIKAAEANICGQWSKDPRGVEIKEFTKGITILGTNGSSANFGIWVVNSSNVVVRNMRFGYMPGGAKDGDAIRIDNSPNVWIDHNEIFAKNFECAGTPDNDTTFESAVDIKKASTNVTVSYNFIHGVKKVGLSGSSNTDTGRNLTYHHNIYSDVNSRLPLQRGGQVHAYNNLYDGIKSSGFNVRQKGIALIESNWFENALNPVTARNDDSNFGTWELRNNNITSPSDFAKYKITWGKPSTPHINADDWKSTGKFPAVSYSYSPVSAQCVKDKLANYAGVGKNQAVLTAANCK | ||||||
Disulfide bond | 93↔176 | |||||
Sequence: CGQWSKDPRGVEIKEFTKGITILGTNGSSANFGIWVVNSSNVVVRNMRFGYMPGGAKDGDAIRIDNSPNVWIDHNEIFAKNFEC | ||||||
Disulfide bond | 350↔373 | |||||
Sequence: CVKDKLANYAGVGKNQAVLTAANC |
Keywords
- PTM
Interaction
Protein-protein interaction databases
Structure
Sequence
- Sequence statusComplete
- Sequence processingThe displayed sequence is further processed into a mature form.
- Length374
- Mass (Da)40,178
- Last updated2004-08-16 v1
- ChecksumDDDA152B0F49CDDA
Sequence caution
Features
Showing features for sequence conflict.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Sequence conflict | 13 | in Ref. 2; CAA57439 | ||||
Sequence: L → V | ||||||
Sequence conflict | 51-66 | in Ref. 1; AA sequence | ||||
Sequence: VDIIEAAKKDSSGKVV → INLIEEAQLDSKGKKL | ||||||
Sequence conflict | 65 | in Ref. 2; CAA57439 | ||||
Sequence: V → A | ||||||
Sequence conflict | 71 | in Ref. 1; AAA24845 and 2; CAA57439 | ||||
Sequence: F → Y | ||||||
Sequence conflict | 112 | in Ref. 1; AAA24845 | ||||
Sequence: I → L | ||||||
Sequence conflict | 128 | in Ref. 1; AAA24845 | ||||
Sequence: V → L | ||||||
Sequence conflict | 128 | in Ref. 2; CAA57439 | ||||
Sequence: V → M | ||||||
Sequence conflict | 135 | in Ref. 2; CAA57439 | ||||
Sequence: V → I | ||||||
Sequence conflict | 154 | in Ref. 1; AAA24845 | ||||
Sequence: I → V | ||||||
Sequence conflict | 195 | in Ref. 1; AAA24845 | ||||
Sequence: A → G | ||||||
Sequence conflict | 205 | in Ref. 1; AAA24845 and 2; CAA57439 | ||||
Sequence: F → Y | ||||||
Sequence conflict | 228 | in Ref. 1; AAA24845 | ||||
Sequence: Y → H | ||||||
Sequence conflict | 233 | in Ref. 1; AAA24845 | ||||
Sequence: Y → H | ||||||
Sequence conflict | 252 | in Ref. 1; AAA24845 | ||||
Sequence: N → T | ||||||
Sequence conflict | 256 | in Ref. 2; CAA57439 | ||||
Sequence: D → G | ||||||
Sequence conflict | 314 | in Ref. 2; CAA57439 | ||||
Sequence: K → N | ||||||
Sequence conflict | 340 | in Ref. 1; AAA24845 and 2; CAA57439 | ||||
Sequence: S → P | ||||||
Sequence conflict | 357 | in Ref. 2; CAA57439 | ||||
Sequence: N → S |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
M18859 EMBL· GenBank· DDBJ | AAA24845.1 EMBL· GenBank· DDBJ | Genomic DNA | Different initiation | |
X81847 EMBL· GenBank· DDBJ | CAA57439.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
BX950851 EMBL· GenBank· DDBJ | CAG76964.1 EMBL· GenBank· DDBJ | Genomic DNA |