Q6A332 · ALY3_ARATH
- ProteinProtein ALWAYS EARLY 3
- GeneALY3
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids1132 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score3/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | DRM complex | |
Biological Process | DNA-templated transcription |
Names & Taxonomy
Protein names
- Recommended nameProtein ALWAYS EARLY 3
- Short namesAtALY3
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionQ6A332
- Secondary accessions
Proteomes
Organism-specific databases
Genome annotation databases
Subcellular Location
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000394047 | 1-1132 | Protein ALWAYS EARLY 3 | |||
Sequence: MAPSRSKKSKYKKKPRAKAVSPHKDEESMSKTKQRKRKLSDMLGPQWSKEELERFYEGYRKFGKEWKKVAGFVHSRSAEMVEALYTMNKAYLSLPEGTASVVGLTAMMTDHYSVLHGGSDSEQENNEGIETPRSAPKRSRVKSSDHPSIGLEGLSDRLQFRSSSGFMPSLKKRRTETMPRAVGKRTPRIPISYTLEKDTRERYLSPVKRGLNQKGDDTDDDMEHEIALALAEASQRGGSTKNSHTPNRKAKMYPPDKKGERMRADIDLAIAKLHATDMEDVRCEPSLGSTEADNADYSGGRNDLTHGEGSSAVEKQQKGRTYYRRRVGIKEEDAKEACSGTDEAPSLGAPDEKFEQEREGKALKFTYKVSRRKSKKSLFTADEDTACDALHTLADLSLMMPETATDTESSVQAEEKKAGEAYVSDFKGTDPASMSKSSSLRNSKQRRYGSNDLCNPELERKSPSSSLIQKRRQKALPAKVRENVLKDELAASSQVIEPCNSKGIGEEYKPVGRGKRSASIRNSHEKKSAKSHDHTSSSNNIVEEDESAPSNAVIKKQVNLPTKVRSRRKIVTEKPLTIDDGKISETIEKFSHCISSFRARRWCIFEWFYSAIDYPWFARQEFVEYLDHVGLGHVPRLTRVEWGVIRSSLGKPRRFSEQFLKEEKEKLYLYRDSVRKHYDELNTGMREGLPMDLARPLNVSQRVICLHPKSREIHDGNVLTVDHCRYRIQFDNPELGVEFVKDTECMPLNPLENMPASLARHYAFSNYHIQNPIEEKMHERAKESMLEGYPKLSCETGHLLSSPNYNISNSLKQEKVDISSSNPQAQDGVDEALALQLFNSQPSSIGQIQAREADVQALSELTRALDKKELVLRELKCMNDEVVESQKDGHNNALKDSESFKKQYAAVLFQLSEINEQVSLALLGLRQRNTYQENVPYSSIRRMSKSGEPDGQLTYEDNNASDTNGFHVSEIVESSRIKARKMVYRAVQALELLRKDENNNVNMEEAIDFVNNQLSIDQTEGSSVQQTQGGQDQRLPSTPNPPSSTPANDSHLNQPDQNDLQVPSDLVSRCIATLLMIQKCTERQFPPSEVAQVLDSAVASLQPCCSQNLPIYTEIQKCMGIIRNQILALVPS |
Proteomic databases
PTM databases
Expression
Tissue specificity
Expressed ubiquitously in vegetative and reproductive tissues.
Gene expression databases
Structure
Family & Domains
Features
Showing features for compositional bias, region, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-18 | Basic residues | ||||
Sequence: MAPSRSKKSKYKKKPRAK | ||||||
Region | 1-43 | Disordered | ||||
Sequence: MAPSRSKKSKYKKKPRAKAVSPHKDEESMSKTKQRKRKLSDML | ||||||
Compositional bias | 19-43 | Basic and acidic residues | ||||
Sequence: AVSPHKDEESMSKTKQRKRKLSDML | ||||||
Domain | 42-93 | SANT | ||||
Sequence: MLGPQWSKEELERFYEGYRKFGKEWKKVAGFVHSRSAEMVEALYTMNKAYLS | ||||||
Region | 115-157 | Disordered | ||||
Sequence: LHGGSDSEQENNEGIETPRSAPKRSRVKSSDHPSIGLEGLSDR | ||||||
Compositional bias | 116-130 | Polar residues | ||||
Sequence: HGGSDSEQENNEGIE | ||||||
Compositional bias | 131-145 | Basic and acidic residues | ||||
Sequence: TPRSAPKRSRVKSSD | ||||||
Region | 234-257 | Disordered | ||||
Sequence: SQRGGSTKNSHTPNRKAKMYPPDK | ||||||
Region | 283-321 | Disordered | ||||
Sequence: CEPSLGSTEADNADYSGGRNDLTHGEGSSAVEKQQKGRT | ||||||
Region | 333-357 | Disordered | ||||
Sequence: DAKEACSGTDEAPSLGAPDEKFEQE | ||||||
Region | 422-476 | Disordered | ||||
Sequence: YVSDFKGTDPASMSKSSSLRNSKQRRYGSNDLCNPELERKSPSSSLIQKRRQKAL | ||||||
Compositional bias | 430-450 | Polar residues | ||||
Sequence: DPASMSKSSSLRNSKQRRYGS | ||||||
Compositional bias | 457-471 | Polar residues | ||||
Sequence: ELERKSPSSSLIQKR | ||||||
Region | 500-554 | Disordered | ||||
Sequence: NSKGIGEEYKPVGRGKRSASIRNSHEKKSAKSHDHTSSSNNIVEEDESAPSNAVI | ||||||
Compositional bias | 508-540 | Basic and acidic residues | ||||
Sequence: YKPVGRGKRSASIRNSHEKKSAKSHDHTSSSNN | ||||||
Region | 941-963 | Disordered | ||||
Sequence: RRMSKSGEPDGQLTYEDNNASDT | ||||||
Region | 1018-1059 | Disordered | ||||
Sequence: QTEGSSVQQTQGGQDQRLPSTPNPPSSTPANDSHLNQPDQND |
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length1,132
- Mass (Da)127,569
- Last updated2004-09-13 v1
- ChecksumDF706F7BD38A031D
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A1I9LMF3 | A0A1I9LMF3_ARATH | ALY3 | 1128 |
Sequence caution
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-18 | Basic residues | ||||
Sequence: MAPSRSKKSKYKKKPRAK | ||||||
Compositional bias | 19-43 | Basic and acidic residues | ||||
Sequence: AVSPHKDEESMSKTKQRKRKLSDML | ||||||
Compositional bias | 116-130 | Polar residues | ||||
Sequence: HGGSDSEQENNEGIE | ||||||
Compositional bias | 131-145 | Basic and acidic residues | ||||
Sequence: TPRSAPKRSRVKSSD | ||||||
Compositional bias | 430-450 | Polar residues | ||||
Sequence: DPASMSKSSSLRNSKQRRYGS | ||||||
Compositional bias | 457-471 | Polar residues | ||||
Sequence: ELERKSPSSSLIQKR | ||||||
Compositional bias | 508-540 | Basic and acidic residues | ||||
Sequence: YKPVGRGKRSASIRNSHEKKSAKSHDHTSSSNN |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AJ583497 EMBL· GenBank· DDBJ | CAE47462.1 EMBL· GenBank· DDBJ | mRNA | ||
AP001305 EMBL· GenBank· DDBJ | BAB03056.1 EMBL· GenBank· DDBJ | Genomic DNA | Sequence problems. | |
CP002686 EMBL· GenBank· DDBJ | AEE76508.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
BT011578 EMBL· GenBank· DDBJ | AAS46631.1 EMBL· GenBank· DDBJ | mRNA | ||
BT012245 EMBL· GenBank· DDBJ | AAS76732.1 EMBL· GenBank· DDBJ | mRNA | ||
AK230069 EMBL· GenBank· DDBJ | BAF01889.1 EMBL· GenBank· DDBJ | mRNA |