Q69K07 · PUS4_ORYSJ

Function

Features

Showing features for active site.

144850100150200250300350400
TypeIDPosition(s)Description
Active site228

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentmitochondrion
Molecular Functionpseudouridine synthase activity
Molecular FunctionRNA binding
Biological Processenzyme-directed rRNA pseudouridine synthesis

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    RNA pseudouridine synthase 4, mitochondrial
  • EC number
  • Alternative names
    • RNA pseudouridylate synthase 4
    • RNA-uridine isomerase 4

Gene names

    • ORF names
      OSJNBa0006G10.3, P0414D03.35
    • Ordered locus names
      Os09g0103500, LOC_Os09g01620

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Nipponbare
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa

Accessions

  • Primary accession
    Q69K07
  • Secondary accessions
    • A0A0P0XJK3

Proteomes

Genome annotation databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for transit peptide, chain.

TypeIDPosition(s)Description
Transit peptide1-69Mitochondrion
ChainPRO_000036802570-448RNA pseudouridine synthase 4, mitochondrial

Proteomic databases

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain84-170S4 RNA-binding

Sequence similarities

Belongs to the pseudouridine synthase RluA family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Sequence processing
    The displayed sequence is further processed into a mature form.
  • Length
    448
  • Mass (Da)
    49,035
  • Last updated
    2004-09-13 v1
  • Checksum
    85AD88515EB7283F
MAALLYLRRRAAAAALAGVAPKPQWLATAARRGALVSGDDGGETGERGKSPWLQLPPFAPLDAAAAARAISRGGGEGGDGEQGATAIKWVRRCCPDLPTSLVQKLFRLRKVKKNVVTAEISSADASAEQHRLRRVSAKDQLMPGDILFLPVNLKESSVAEKTKKFDNRNEINFLRGLEIYKDEAIIVVNKPPGMPVQGGVGIKNSIDVLASMFEENSSEAPRLVHRLDRDCSGILVLGRNQLSTSMLHAIFREKTADALADGTQHVLQRKYVALVIGTPRHPKGLLSAPLAKILLQDGKSERLTIRASSNAASVQDALTEYRVIESCPQGYTWLELFPRTGRKHQRFLEPQLLGITSMDGKRIRSGCLFPCHGQLMRNCSGKGSFPLGLLWVAEASLRSNLSFIYTASKWFFLMSQWLFIGCSLQTLILISQILRSSTLLLHCRCICG

Features

Showing features for sequence conflict.

TypeIDPosition(s)Description
Sequence conflict32in Ref. 4; AK065573
Sequence conflict79in Ref. 4; AK065573

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AP005909
EMBL· GenBank· DDBJ
BAD34146.1
EMBL· GenBank· DDBJ
Genomic DNA
AP006061
EMBL· GenBank· DDBJ
BAD36694.1
EMBL· GenBank· DDBJ
Genomic DNA
AP008215
EMBL· GenBank· DDBJ
BAF24470.1
EMBL· GenBank· DDBJ
Genomic DNA
AP014965
EMBL· GenBank· DDBJ
BAT06782.1
EMBL· GenBank· DDBJ
Genomic DNA
AK065573
EMBL· GenBank· DDBJ
-mRNA No translation available.

Genome annotation databases

Similar Proteins

Disclaimer

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