Q682D3 · XRCC2_ARATH
- ProteinDNA repair protein XRCC2 homolog
- GeneXRCC2
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids372 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score3/5
Function
function
Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions.
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | Rad51B-Rad51C-Rad51D-XRCC2 complex | |
Cellular Component | replication fork | |
Molecular Function | ATP binding | |
Molecular Function | ATP-dependent DNA damage sensor activity | |
Molecular Function | DNA binding | |
Biological Process | double-strand break repair via homologous recombination | |
Biological Process | reciprocal meiotic recombination |
Keywords
- Molecular function
- Biological process
Names & Taxonomy
Protein names
- Recommended nameDNA repair protein XRCC2 homolog
- Alternative names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionQ682D3
- Secondary accessions
Proteomes
Organism-specific databases
Genome annotation databases
Subcellular Location
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000122950 | 1-372 | DNA repair protein XRCC2 homolog | |||
Sequence: MGDDEARSWIRGDETAKQMLSRVLKDRAFLLIPPLHRVPLRAGNVVEITGASTSAKTQILIQAAISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQANWLGNGAWWQLEESNVKSCKSAEEKTKTVFDEELYASCMKRFLYVRCYDSLELLSSLKTLHYRIQQQEACGSQVGVLMIDSIGAFHWTDRLSSSLALETHNRKSLSLTNVVETIVQELKKLLLVHSLVVLATKGTIYEEKYPANENNRKVSSNDHFSGNVASKAQQPPFREFMPSSWQAFVTHKIIIRKSADYQSLQTGQQNLLAYSLEWLQPQLSRIDRFIVDDVRKLTTIKPFYSKLLLIYIVIPASSSHAVWYCHCLVT |
Proteomic databases
PTM databases
Expression
Gene expression databases
Structure
Family & Domains
Sequence similarities
Belongs to the RecA family. RAD51 subfamily.
Phylogenomic databases
Family and domain databases
Sequence & Isoform
- Sequence statusComplete
This entry describes 2 isoforms produced by Alternative splicing.
Q682D3-1
This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
- Name1
- Synonymsalpha
- Length372
- Mass (Da)42,361
- Last updated2004-11-09 v2
- Checksum8B3C86FF530ED788
Q682D3-2
- Name2
- Synonymsbeta
Computationally mapped potential isoform sequences
There are 10 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A178UJL6 | A0A178UJL6_ARATH | XRCC2 | 364 | ||
A0A1P8BBI8 | A0A1P8BBI8_ARATH | XRCC2 | 291 | ||
A0A1P8BBG4 | A0A1P8BBG4_ARATH | XRCC2 | 370 | ||
A0A1P8BBG6 | A0A1P8BBG6_ARATH | XRCC2 | 212 | ||
A0A1P8BBH3 | A0A1P8BBH3_ARATH | XRCC2 | 378 | ||
A0A1P8BBF0 | A0A1P8BBF0_ARATH | XRCC2 | 314 | ||
A0A1P8BBF2 | A0A1P8BBF2_ARATH | XRCC2 | 342 | ||
A0A1P8BBF9 | A0A1P8BBF9_ARATH | XRCC2 | 348 | ||
F4KDQ6 | F4KDQ6_ARATH | XRCC2 | 342 | ||
A0A2H1ZE99 | A0A2H1ZE99_ARATH | XRCC2 | 348 |
Sequence caution
Features
Showing features for alternative sequence.
Keywords
- Coding sequence diversity
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AJ421043 EMBL· GenBank· DDBJ | CAD12880.1 EMBL· GenBank· DDBJ | mRNA | ||
AB010076 EMBL· GenBank· DDBJ | BAB11419.1 EMBL· GenBank· DDBJ | Genomic DNA | Sequence problems. | |
CP002688 EMBL· GenBank· DDBJ | AED97911.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AK175434 EMBL· GenBank· DDBJ | BAD43197.1 EMBL· GenBank· DDBJ | mRNA |