Q67UE8 · LYP4_ORYSJ

Function

function

Functions in innate immunity. Functions as a pattern recognition receptor (PRR), sensing bacterial peptidoglycan (PGN) and fungal chitin at the cell surface. Involved in resistance against the bacterial pathogen Xanthomonas oryzae pv. oryzae (Xoo) and the fungal pathogen Magnaporthe oryzae. Binds PGN and fungal chitin in vitro (PubMed:22872757).
Involved in microbe-associated molecular patterns (MAMPs) perception and participates in the activation of defense genes against the bacterial pathogen Xanthomonas oryzae pv. oryzicola (Xoc) or the fungal pathogen Magnaporthe oryzae (PubMed:23299421).

Miscellaneous

Plants silencing LYP4 exhibit significant compromised defense responses and enhanced susceptibility toward the bacterial pathogen Xanthomonas oryzae and the fungal pathogen Magnaporthe oryzae.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentplasma membrane
Cellular Componentside of membrane
Biological Processinnate immune response

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    LysM domain-containing GPI-anchored protein LYP4
  • Alternative names
    • LysM domain-containing protein 4
      (Os-LYP4
      )

Gene names

    • Name
      LYP4
    • ORF names
      OJ1163_C07.33
      , OsJ_29593
      , P0488D02.10
    • Ordered locus names
      Os09g0452200
      , LOC_Os09g27890

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Nipponbare
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa

Accessions

  • Primary accession
    Q67UE8

Proteomes

Genome annotation databases

Subcellular Location

Cell membrane
; Lipid-anchor, GPI-anchor

Keywords

PTM/Processing

Features

Showing features for signal, chain, disulfide bond, glycosylation, lipidation, propeptide.

TypeIDPosition(s)Description
Signal1-23
ChainPRO_501014133624-373LysM domain-containing GPI-anchored protein LYP4
Disulfide bond30↔96
Disulfide bond36↔162
Disulfide bond94↔160
Disulfide bond96↔162
Disulfide bond223↔255
Glycosylation240N-linked (GlcNAc...) asparagine
Disulfide bond250↔279
Glycosylation281N-linked (GlcNAc...) asparagine
Glycosylation288N-linked (GlcNAc...) asparagine
Glycosylation310N-linked (GlcNAc...) asparagine
Lipidation373GPI-anchor amidated serine
PropeptidePRO_0000440896374-401Removed in mature form

Keywords

Proteomic databases

PTM databases

Expression

Tissue specificity

Expressed in roots and leaves.

Induction

Induced by infection with the bacterial pathogen Xanthomonas oryzae pv. oryzae.

Interaction

Subunit

Interacts with LYP6 (PubMed:23299421).
Interacts with CEBIP (PubMed:23299421, PubMed:24964058).
Interacts with CERK1 (PubMed:24964058, PubMed:25335639).

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain106-156LysM 1
Domain175-218LysM 2

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Sequence processing
    The displayed sequence is further processed into a mature form.
  • Length
    401
  • Mass (Da)
    40,680
  • Last updated
    2004-10-11 v1
  • Checksum
    5C5B4951625AD2C0
MPPPLLLLLLLAAAAAAVAPARSKSTLESCSSSTACPALLSYTLYADLKLAELAALFSADPLAILAANSIDFAVPDPADRILPAGLPLRVPVPCACSDGIRRVTTVRYVARPGDTLASVASSVYGGLTTPDWISDSNGILGAKPDAAVDAGTTLFVPLHCACFGGVDNGLPAVYLTYVAGKGDTVAAVAQRYRTTATDLMSVNDMATPELAAGDIIVVPLPACTSSFPAFTADYGLAVANGTYAVTANRCVQCSCGPGNLDLFCVPAPLADSTCSSMQCANSSMMLGNFTLLMTSSGCSVTSCSYGGFVNGTILTTLTTALKPQCPGPHQYPPLIPPPTSSFFETYLGPSPTPMASEGGVMAGMAPTSTPAASSGPPPAGRHVVGDVLGAFALCLVGNLLW

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AP005393
EMBL· GenBank· DDBJ
BAD38015.1
EMBL· GenBank· DDBJ
Genomic DNA
AP005559
EMBL· GenBank· DDBJ
BAD38221.1
EMBL· GenBank· DDBJ
Genomic DNA
AP008215
EMBL· GenBank· DDBJ
BAF25249.1
EMBL· GenBank· DDBJ
Genomic DNA
AP014965
EMBL· GenBank· DDBJ
BAT08391.1
EMBL· GenBank· DDBJ
Genomic DNA
CM000146
EMBL· GenBank· DDBJ
EEE69832.1
EMBL· GenBank· DDBJ
Genomic DNA
AK059479
EMBL· GenBank· DDBJ
BAG87005.1
EMBL· GenBank· DDBJ
mRNA
AK106042
EMBL· GenBank· DDBJ
BAG97526.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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