Q654Y6 · Q654Y6_ORYSJ

Function

function

Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents.

Cofactor

Mg2+ (UniProtKB | Rhea| CHEBI:18420 )

Note: Binds 2 magnesium ions.

Features

Showing features for binding site.

111251002003004005006007008009001,0001,100
TypeIDPosition(s)Description
Binding site383Mg2+ 1 (UniProtKB | ChEBI)
Binding site480Mg2+ 1 (UniProtKB | ChEBI)
Binding site481Mg2+ 1 (UniProtKB | ChEBI)

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular Functiondamaged DNA binding
Molecular Functiondeoxycytidyl transferase activity
Molecular FunctionDNA-directed DNA polymerase activity
Molecular Functionmetal ion binding
Biological Processerror-free translesion synthesis
Biological Processerror-prone translesion synthesis
Biological Processresponse to UV-B

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    DNA repair protein REV1
  • EC number

Gene names

    • ORF names
      OSNPB_060691000
    • Ordered locus names
      Os06g0691000

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Nipponbare
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa

Accessions

  • Primary accession
    Q654Y6

Proteomes

Genome annotation databases

Subcellular Location

Keywords

  • Cellular component

PTM/Processing

Proteomic databases

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for region, compositional bias, domain.

TypeIDPosition(s)Description
Region1-49Disordered
Compositional bias32-46Polar residues
Domain83-174BRCT
Compositional bias199-220Polar residues
Region199-259Disordered
Compositional bias221-254Basic and acidic residues
Region302-326Disordered
Domain379-560UmuC
Region776-811Disordered
Compositional bias788-803Polar residues
Region968-994Disordered

Sequence similarities

Belongs to the DNA polymerase type-Y family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    1,125
  • Mass (Da)
    123,768
  • Last updated
    2004-10-25 v1
  • Checksum
    0B5903FCD290D390
MSASSSGGRGAPPPATAASPGQKRPRGDDPASPSNRSESAPAKNPRRAFSSSPFADFGSYMAAKNSKLAAQFEADASTSAAEVTGGVFAGVSIFVDGFTVPSSQELKEIMLNNGGRFVNYFSRNTVTHIICTHLPNSKMSNLRAFSKGLPVVKPAWVVDSLAENRLLSCVPYQISQHNSSSRKQTKLSSFFSGRHYQGELNDQSNSHELQSSSVQEGSQDHNSGCEKEGSLLKEEASKDSLSSDDHKASMFEEQDSEDFVDEAGNAYETACSERRDNDMDGKLHVAESPDIRSRCSNLCSTSSTGSHLSLDSLDRNATKSSSRTHSTLTDPNFVENYFKYSRLHFIGTWRNRYRKRFSNLLGDKSSKGNRDHSGKNNTIIHIDMDCFFVSVVIRNKPELHDKPVAVCHSDNPKGTAEISSANYPARNYGIKAGMFVREAKARCPHLMIVPYDFDAYGEVADQFYGILHKYCSKVQALSCDEAFLDMTECLHDNPEEVTQKIRNEIFGTTKCSASAGISGNMLIARLATRSAKPNGQCFISSEKVDGYLNTLSIKALPGIGHTVSDKLKSKEVEYCGQLRNIPKESLHKDFGKKIGDMLWNYCRGIDHSVVEAVQETKSVGAEVNWGVRFNDNKDAENFLVNLSKEVCLRLEGCGVQGRTITLKLKTRRKGAGEPIKFMGCGDCETVSRSMTIAGATDNPVTLQRIAKQLFSSFCVDVKEVRGVGLKISRLEHADLARGAPQGNMLESWLASPSDKLKKHSTEKACLLKNRDDAATSERRGFGSIRPSGIGGTSRSSEVNPPSDRSTRVGVELPPLSELDLEVLKNLPPEIIYEMNDMYKGELHGFLGITSGDKAKESNTKSLVFPAVDQNLVPVLDTKLHGDGKHKDSIHFKKEADIKGPSGEQLSELKQANAPRSIASELVDIPTKSVIQHDFMPNSLSQADVTVLQELPEDVKADLFNALPLHRSGDPTCSTSHVSENKFPQDGRSDDPKQHPQICHLPGNSQKWIEEFRVSHCLILNVIAEQHTDSISSRPLSSVLEPVISYLPLCPNSGTEEWNEAFASLSELLTQYIHQKVESDIEELHKCFRLLKRLSSGSELFLELHDSILPLLQDSVRQHYGGILHL

Computationally mapped potential isoform sequences

There is 1 potential isoform mapped to this entry

View all
EntryEntry nameGene nameLength
A0A0P0X064A0A0P0X064_ORYSJOs06g0691000901

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias32-46Polar residues
Compositional bias199-220Polar residues
Compositional bias221-254Basic and acidic residues
Compositional bias788-803Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AP014962
EMBL· GenBank· DDBJ
BAS99233.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.
FeedbackHelp