Q651B6 · SLC2_ORYSJ
- ProteinProbable 2-oxoglutarate-dependent dioxygenase SLC2
- GeneSLC2
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids378 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score3/5
Function
function
Involved in the regulation of shoot development and salicylic acid (SA) homeostasis.
Miscellaneous
Plants overexpressing SLC1 are infertile and exhibit defects in shoot development characterized by slender and crinkly leaves.
Cofactor
Protein has several cofactor binding sites:
Note: Binds 1 Fe2+ ion per subunit.
Features
Showing features for binding site.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Binding site | 237 | Fe cation (UniProtKB | ChEBI) | ||||
Sequence: H | ||||||
Binding site | 239 | Fe cation (UniProtKB | ChEBI) | ||||
Sequence: D | ||||||
Binding site | 295 | Fe cation (UniProtKB | ChEBI) | ||||
Sequence: H | ||||||
Binding site | 305 | 2-oxoglutarate (UniProtKB | ChEBI) | ||||
Sequence: R | ||||||
Binding site | 307 | 2-oxoglutarate (UniProtKB | ChEBI) | ||||
Sequence: S |
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | cytoplasm | |
Cellular Component | nucleus | |
Molecular Function | 2-oxoglutarate-dependent dioxygenase activity | |
Molecular Function | metal ion binding |
Keywords
- Molecular function
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameProbable 2-oxoglutarate-dependent dioxygenase SLC2
- EC number
- Alternative names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa
Accessions
- Primary accessionQ651B6
- Secondary accessions
Proteomes
Genome annotation databases
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000449376 | 1-378 | Probable 2-oxoglutarate-dependent dioxygenase SLC2 | |||
Sequence: MAILERAEEANIGEGSGSSEWELGVRQLCDSGITTLPARYVLPPADRPARYVTPPALLPVVDLAALRARDPCQLAALHAACRDYGFFQLLNHGVPPDAMLYAARRFFFDLPLPARKRYMSADIRAAVRYGTSFNQLNDAVLSWRDFLKLLIRDTRRLADVLPSWPDAPDDLRPAAAAYATACQRLFRELMEAALDALGIVRCRRQLLEECDAGSQMMMVNCFPACPEPELTLGMPPHSDYGLLTILLQDEVRGLEVSYGDGGGWAVVEPLPGAVVVNVGDHLEILSNGLYRSVLHRVRVNGRRARVSVASLHSLAAERVIGPAAELVDEQRGRPRRYMDTDMAAFLAYLASAEGNHKSFLHSRRINTISSSGLTQPSN |
Proteomic databases
Interaction
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 213-314 | Fe2OG dioxygenase | ||||
Sequence: GSQMMMVNCFPACPEPELTLGMPPHSDYGLLTILLQDEVRGLEVSYGDGGGWAVVEPLPGAVVVNVGDHLEILSNGLYRSVLHRVRVNGRRARVSVASLHSL |
Sequence similarities
Belongs to the iron/ascorbate-dependent oxidoreductase family.
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length378
- Mass (Da)41,620
- Last updated2004-10-25 v1
- Checksum9874B329DA043EF6
Sequence caution
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AP006162 EMBL· GenBank· DDBJ | BAD46601.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AP008215 EMBL· GenBank· DDBJ | BAF25903.1 EMBL· GenBank· DDBJ | Genomic DNA | Different initiation | |
AP014965 EMBL· GenBank· DDBJ | BAT09516.1 EMBL· GenBank· DDBJ | Genomic DNA | Different initiation | |
CM000146 EMBL· GenBank· DDBJ | EAZ45741.1 EMBL· GenBank· DDBJ | Genomic DNA |