Q650T9 · RH7_ORYSJ
- ProteinDEAD-box ATP-dependent RNA helicase 7
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids696 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score3/5
Function
Catalytic activity
- ATP + H2O = ADP + H+ + phosphate
Features
Showing features for binding site.
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Aspect | Term | |
---|---|---|
Cellular Component | nucleolus | |
Molecular Function | ATP binding | |
Molecular Function | ATP hydrolysis activity | |
Molecular Function | mRNA binding | |
Molecular Function | RNA helicase activity | |
Biological Process | RNA metabolic process |
Keywords
- Molecular function
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameDEAD-box ATP-dependent RNA helicase 7
- EC number
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa
Accessions
- Primary accessionQ650T9
- Secondary accessions
Proteomes
Genome annotation databases
Subcellular Location
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000282474 | 1-696 | DEAD-box ATP-dependent RNA helicase 7 | |||
Sequence: MPSLPVAAAEPMAVDESASKKSKRKLKAAEVEVEASSRKKEKKEKKRKAKEPSPSSSSSSEEEERSSTSSDEPAPAAKKAKKEKTKEKVVVEEEEEDDDEGELTASGDEDPADPNALANFRISESLREKLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLPILESLVNGTHKASRRTDYGRPPTVLVLLPTRELAKQVHTDFAFYGATFGLSACCVYGGSDYRSQEMAIRKGVDIVVGTPGRVKDFVEKGTLNFRSLKFRVLDEADEMLNMGFVDDVELILGKVEDVTKVQTLLFSATIPEWVKKLSLRFLKSGKKTVDLVGDEKLKASASVRHLALPCNRAARAQVIPDIIRCYSRGGRTIIFTETKESASDLSGLIAGSRALHGDVAQAQREVILAGFRSGKFLVLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLFEPRYKFNVNRIERESGVKFEHISAPQPTDVAQSAGTEAAEAISSVSDSVIPVFREQAEQLLNSSGMSAVDLLAKALAKAVGYTDIKKRSLLSSMDNHTTLLLQTGRSVYAAGFVLSTLKRFMPEERLADVKGITITADGTGAVFDVPSAEVEDYIQGAQNAAMVTVEEVKQLPPLQEREQSGGSRGGGRFGNRRFSGGGGGRGGGGRGFGGGRGRGGGGGNRFNKRY |
Proteomic databases
Expression
Gene expression databases
Interaction
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for region, compositional bias, coiled coil, motif, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 1-116 | Disordered | ||||
Sequence: MPSLPVAAAEPMAVDESASKKSKRKLKAAEVEVEASSRKKEKKEKKRKAKEPSPSSSSSSEEEERSSTSSDEPAPAAKKAKKEKTKEKVVVEEEEEDDDEGELTASGDEDPADPNA | ||||||
Compositional bias | 16-40 | Basic and acidic residues | ||||
Sequence: ESASKKSKRKLKAAEVEVEASSRKK | ||||||
Coiled coil | 16-97 | |||||
Sequence: ESASKKSKRKLKAAEVEVEASSRKKEKKEKKRKAKEPSPSSSSSSEEEERSSTSSDEPAPAAKKAKKEKTKEKVVVEEEEED | ||||||
Compositional bias | 64-91 | Basic and acidic residues | ||||
Sequence: ERSSTSSDEPAPAAKKAKKEKTKEKVVV | ||||||
Compositional bias | 92-107 | Acidic residues | ||||
Sequence: EEEEEDDDEGELTASG | ||||||
Motif | 115-143 | Q motif | ||||
Sequence: NALANFRISESLREKLKSKGIKALFPIQA | ||||||
Domain | 146-328 | Helicase ATP-binding | ||||
Sequence: FDLVLDGHDLVGRARTGQGKTLAFVLPILESLVNGTHKASRRTDYGRPPTVLVLLPTRELAKQVHTDFAFYGATFGLSACCVYGGSDYRSQEMAIRKGVDIVVGTPGRVKDFVEKGTLNFRSLKFRVLDEADEMLNMGFVDDVELILGKVEDVTKVQTLLFSATIPEWVKKLSLRFLKSGKKT | ||||||
Motif | 274-277 | DEAD box | ||||
Sequence: DEAD | ||||||
Domain | 357-500 | Helicase C-terminal | ||||
Sequence: QVIPDIIRCYSRGGRTIIFTETKESASDLSGLIAGSRALHGDVAQAQREVILAGFRSGKFLVLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLFEPRYKFNVNRIERESGVKFEHISAPQPTDVA | ||||||
Region | 641-696 | Disordered | ||||
Sequence: LPPLQEREQSGGSRGGGRFGNRRFSGGGGGRGGGGRGFGGGRGRGGGGGNRFNKRY |
Domain
The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis.
Sequence similarities
Belongs to the DEAD box helicase family. DDX21/DDX50 subfamily.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length696
- Mass (Da)75,026
- Last updated2004-10-25 v1
- Checksum0E17D2131384D46B
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A0P0XPY8 | A0A0P0XPY8_ORYSJ | Os09g0520700 | 277 |
Features
Showing features for compositional bias, sequence conflict.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 16-40 | Basic and acidic residues | ||||
Sequence: ESASKKSKRKLKAAEVEVEASSRKK | ||||||
Compositional bias | 64-91 | Basic and acidic residues | ||||
Sequence: ERSSTSSDEPAPAAKKAKKEKTKEKVVV | ||||||
Compositional bias | 92-107 | Acidic residues | ||||
Sequence: EEEEEDDDEGELTASG | ||||||
Sequence conflict | 246 | in Ref. 4; AK101403 | ||||
Sequence: I → S |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AP006175 EMBL· GenBank· DDBJ | BAD46678.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AP008215 EMBL· GenBank· DDBJ | BAF25616.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AP014965 EMBL· GenBank· DDBJ | BAT09010.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AK101403 EMBL· GenBank· DDBJ | - | mRNA | No translation available. |