Q64487 · PTPRD_MOUSE
- ProteinReceptor-type tyrosine-protein phosphatase delta
- GenePtprd
- StatusUniProtKB reviewed (Swiss-Prot)
- Organism
- Amino acids1912 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score5/5
Function
function
Involved in pre-synaptic differentiation through interaction with SLITRK2 (PubMed:25989451).
Catalytic activity
- H2O + O-phospho-L-tyrosyl-[protein] = L-tyrosyl-[protein] + phosphate
Features
Showing features for site, binding site, active site.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Site | 266 | Required for interaction with IL1RAP | ||||
Sequence: Y | ||||||
Site | 1181-1182 | Cleavage | ||||
Sequence: RY | ||||||
Binding site | 1521 | substrate | ||||
Sequence: D | ||||||
Active site | 1553 | Phosphocysteine intermediate | ||||
Sequence: C | ||||||
Binding site | 1553-1559 | substrate | ||||
Sequence: CSAGVGR | ||||||
Binding site | 1597 | substrate | ||||
Sequence: Q | ||||||
Active site | 1844 | Phosphocysteine intermediate | ||||
Sequence: C |
GO annotations
Keywords
- Molecular function
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameReceptor-type tyrosine-protein phosphatase delta
- EC number
- Short namesProtein-tyrosine phosphatase delta; R-PTP-delta
Gene names
Organism names
- Organism
- Strains
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Glires > Rodentia > Myomorpha > Muroidea > Muridae > Murinae > Mus > Mus
Accessions
- Primary accessionQ64487
- Secondary accessions
Proteomes
Organism-specific databases
Subcellular Location
Features
Showing features for topological domain, transmembrane.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Topological domain | 21-1266 | Extracellular | ||||
Sequence: ETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGGTPIRGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRELREVRRVPPRFSIPPTNHEIMPGGSVNITCVAVGSPMPYVKWMLGAEDLTPEDDMPIGRNVLELNDVRQSANYTCVAMSTLGVIEAIAQITVKALPKPPGTPVVTESTATSITLTWDSGNPEPVSYYIIQHKPKNSEEPYKEIDGIATTRYSVAGLSPYSDYEFRVVAVNNIGRGPASEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGVPGQPLNFKAEPESETSILLSWTPPRSDTIASYELVYRDGDQGEEQRITIEPGTSYRLQGLKPNSLYYFRLSARSPQGLGASTAEISARTMQSKPSAPPQDISCTSPSSTSILVSWQPPPVEKQNGIITEYSLKYAAVDGEDFKPHEILGIPSDTTKYLLEQLEKWTEYRITVTAHTDVGPGPESLSVLIRTDEDVPSGPPRKVEVEAVNATAVKVSWRSPVPNKQHGQIRGYQVHYVKMENGEPKGQPMLKDVMLADAQWEFDDTTEHDMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPGKPRLVINHTQMNTALIQWHPPVDTFGPLQGYRLKFGRKDMEPLTTLEFSEKEDHFTATDIHKGASYVFRLSARNKVGFGEEMVKEISVPEEIPTGFPQNLHSEGTTSTSVQLSWQPPVLAERNGVITKYTLLYRDINVPLLPMEHLIVPADTSMTLTGLKSDTTYDVKVRAHTSKGPGPYSPSVQFRTLPVDQVFAKNFHVKAVMKTSVLLSWEIPENYNSAMPFKILYDDGKMVEEVDGRATQKLIVNLKPEKSYSFVLTNRGNSAGGLQHRVTAKTAPDVLRTKPAFIGKTNLDGMITVQLPDVPANENIKGYYIIIVPLKKSRGKFIKPWESPDEMELDELLKEISRKRRSIRYGREVELKPYIAAHFDVLPTEFTLGDDKHYGGFTNKQLQSGQEYVFFVLAVMDHAESKMYATSPYSDPVVSMDLDPQPITDEEEG | ||||||
Transmembrane | 1267-1287 | Helical | ||||
Sequence: LIWVVGPVLAVVFIICIVIAI | ||||||
Topological domain | 1288-1912 | Cytoplasmic | ||||
Sequence: LLYKRKRAESESRKSSLPNSKEVPSHHPTDPVELRRLNFQTPGMASHPPIPILELADHIERLKANDNLKFSQEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVLLSAIEGIPGSDYVNANYIDGYRKQNAYIATQGSLPETFGDFWRMIWEQRSATVVMMTKLEERSRVKCDQYWPSRGTETHGLVQVTLLDTVELATYCVRTFALYKNGSSEKREVRQFQFTAWPDHGVPEHPTPFLAFLRRVKTCNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRAQRNYMVQTEDQYIFIHDALLEAVTCGNTEVPARNLYAYIQKLTQIETGENVTGMELEFKRLASSKAHTSRFISANLPCNKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDQYQFCYRAALEYLGSFDHYAT |
Keywords
- Cellular component
Phenotypes & Variants
Features
Showing features for mutagenesis.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Mutagenesis | 68 | Reduces affinity with IL1RAPL1. Reduces the synaptogenic activity to ~7%. | ||||
Sequence: R → A | ||||||
Mutagenesis | 189 | Decreases affinity for interaction with IL1RAPL1. | ||||
Sequence: R → A | ||||||
Mutagenesis | 229 | Abolishes interaction with SLITRK2. | ||||
Sequence: R → E | ||||||
Mutagenesis | 266 | No effect on interaction with SLITRK2. Decreases the affinity for IL1RAPL1. Abolishes interaction with IL1RAP. | ||||
Sequence: Y → A | ||||||
Mutagenesis | 279 | Decreases affinity for IL1RAP. | ||||
Sequence: E → A |
Variants
We now provide the "Disease & Variants" viewer in its own tab.
The viewer provides 55 variants from UniProt as well as other sources including ClinVar and dbSNP.
PTM/Processing
Features
Showing features for signal, chain, disulfide bond, glycosylation.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Signal | 1-20 | |||||
Sequence: MVPVARPLSLLLTFFLCACA | ||||||
Chain | PRO_0000025438 | 21-1912 | Receptor-type tyrosine-protein phosphatase delta | |||
Sequence: ETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGGTPIRGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRELREVRRVPPRFSIPPTNHEIMPGGSVNITCVAVGSPMPYVKWMLGAEDLTPEDDMPIGRNVLELNDVRQSANYTCVAMSTLGVIEAIAQITVKALPKPPGTPVVTESTATSITLTWDSGNPEPVSYYIIQHKPKNSEEPYKEIDGIATTRYSVAGLSPYSDYEFRVVAVNNIGRGPASEPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGVPGQPLNFKAEPESETSILLSWTPPRSDTIASYELVYRDGDQGEEQRITIEPGTSYRLQGLKPNSLYYFRLSARSPQGLGASTAEISARTMQSKPSAPPQDISCTSPSSTSILVSWQPPPVEKQNGIITEYSLKYAAVDGEDFKPHEILGIPSDTTKYLLEQLEKWTEYRITVTAHTDVGPGPESLSVLIRTDEDVPSGPPRKVEVEAVNATAVKVSWRSPVPNKQHGQIRGYQVHYVKMENGEPKGQPMLKDVMLADAQWEFDDTTEHDMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPGKPRLVINHTQMNTALIQWHPPVDTFGPLQGYRLKFGRKDMEPLTTLEFSEKEDHFTATDIHKGASYVFRLSARNKVGFGEEMVKEISVPEEIPTGFPQNLHSEGTTSTSVQLSWQPPVLAERNGVITKYTLLYRDINVPLLPMEHLIVPADTSMTLTGLKSDTTYDVKVRAHTSKGPGPYSPSVQFRTLPVDQVFAKNFHVKAVMKTSVLLSWEIPENYNSAMPFKILYDDGKMVEEVDGRATQKLIVNLKPEKSYSFVLTNRGNSAGGLQHRVTAKTAPDVLRTKPAFIGKTNLDGMITVQLPDVPANENIKGYYIIIVPLKKSRGKFIKPWESPDEMELDELLKEISRKRRSIRYGREVELKPYIAAHFDVLPTEFTLGDDKHYGGFTNKQLQSGQEYVFFVLAVMDHAESKMYATSPYSDPVVSMDLDPQPITDEEEGLIWVVGPVLAVVFIICIVIAILLYKRKRAESESRKSSLPNSKEVPSHHPTDPVELRRLNFQTPGMASHPPIPILELADHIERLKANDNLKFSQEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVLLSAIEGIPGSDYVNANYIDGYRKQNAYIATQGSLPETFGDFWRMIWEQRSATVVMMTKLEERSRVKCDQYWPSRGTETHGLVQVTLLDTVELATYCVRTFALYKNGSSEKREVRQFQFTAWPDHGVPEHPTPFLAFLRRVKTCNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRAQRNYMVQTEDQYIFIHDALLEAVTCGNTEVPARNLYAYIQKLTQIETGENVTGMELEFKRLASSKAHTSRFISANLPCNKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDQYQFCYRAALEYLGSFDHYAT | ||||||
Disulfide bond | 45↔98 | |||||
Sequence: CQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYEC | ||||||
Disulfide bond | 147↔207 | |||||
Sequence: CAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGGTPIRGALQIEQSEESDQGKYEC | ||||||
Glycosylation | 254 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Disulfide bond | 257↔302 | |||||
Sequence: CVAVGSPMPYVKWMLGAEDLTPEDDMPIGRNVLELNDVRQSANYTC | ||||||
Glycosylation | 299 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 724 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 832 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N |
Post-translational modification
Keywords
- PTM
Proteomic databases
PTM databases
Expression
Tissue specificity
Gene expression databases
Interaction
Subunit
Interacts (via extracellular domain) with SLITRK4 (via LRR 1 and 2 repeats) (PubMed:25989451).
Interacts with SLITRK2; induces presynaptic differentiation (PubMed:25989451).
Interacts (via the second immunoglobilin domain) with IL1RAPL1 (via the first immunoglobilin domain); induces pre- and postsynaptic differentiation of neurons and synapse formation. Isoform G, isoform H, isoform I, isoform J, and isoform K do not interact with IL1RAPL1 (PubMed:21940441, PubMed:25908590).
Interacts (via the third immunoglobilin domain) with IL1RAP (via the first immunoglobilin domain); induces pre- and postsynaptic differentiation of neurons (PubMed:25908590).
Binary interactions
Type | Entry 1 | Entry 2 | Number of experiments | Intact | |
---|---|---|---|---|---|
BINARY | Q64487 | Il1rapl1 P59823 | 6 | EBI-771834, EBI-5452114 |
Protein-protein interaction databases
Miscellaneous
Structure
Family & Domains
Features
Showing features for domain, region.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 24-114 | Ig-like C2-type 1 | ||||
Sequence: PRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLT | ||||||
Domain | 126-224 | Ig-like C2-type 2 | ||||
Sequence: PTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGGTPIRGALQIEQSEESDQGKYECVATNSAGTRYSAPANLY | ||||||
Region | 181-189 | Mini-exon peptide A9; sufficient for interaction with IL1RAPL1 | ||||
Sequence: ESIGGTPIR | ||||||
Region | 227-230 | Mini-exon peptide B; required for interaction with SLITRK2 and in the function in pre-synaptic differentiation; Acts as an adjustable linker to control relative positions and orientations of the PTPRD second and third immunoglobilin domains for their simultaneous interactions with the first immunoglobilin domain of IL1RAPL1 and IL1RAP; Modulates affinity for IL1RAPL1 and IL1RAP | ||||
Sequence: ELRE | ||||||
Domain | 236-318 | Ig-like C2-type 3 | ||||
Sequence: PRFSIPPTNHEIMPGGSVNITCVAVGSPMPYVKWMLGAEDLTPEDDMPIGRNVLELNDVRQSANYTCVAMSTLGVIEAIAQIT | ||||||
Domain | 325-415 | Fibronectin type-III 1 | ||||
Sequence: PPGTPVVTESTATSITLTWDSGNPEPVSYYIIQHKPKNSEEPYKEIDGIATTRYSVAGLSPYSDYEFRVVAVNNIGRGPASEPVLTQTSEQ | ||||||
Domain | 420-516 | Fibronectin type-III 2 | ||||
Sequence: APRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGVP | ||||||
Domain | 518-607 | Fibronectin type-III 3 | ||||
Sequence: QPLNFKAEPESETSILLSWTPPRSDTIASYELVYRDGDQGEEQRITIEPGTSYRLQGLKPNSLYYFRLSARSPQGLGASTAEISARTMQS | ||||||
Domain | 612-709 | Fibronectin type-III 4 | ||||
Sequence: PPQDISCTSPSSTSILVSWQPPPVEKQNGIITEYSLKYAAVDGEDFKPHEILGIPSDTTKYLLEQLEKWTEYRITVTAHTDVGPGPESLSVLIRTDED | ||||||
Domain | 714-822 | Fibronectin type-III 5 | ||||
Sequence: PPRKVEVEAVNATAVKVSWRSPVPNKQHGQIRGYQVHYVKMENGEPKGQPMLKDVMLADAQWEFDDTTEHDMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGA | ||||||
Domain | 823-916 | Fibronectin type-III 6 | ||||
Sequence: VPGKPRLVINHTQMNTALIQWHPPVDTFGPLQGYRLKFGRKDMEPLTTLEFSEKEDHFTATDIHKGASYVFRLSARNKVGFGEEMVKEISVPEE | ||||||
Domain | 921-1016 | Fibronectin type-III 7 | ||||
Sequence: FPQNLHSEGTTSTSVQLSWQPPVLAERNGVITKYTLLYRDINVPLLPMEHLIVPADTSMTLTGLKSDTTYDVKVRAHTSKGPGPYSPSVQFRTLPV | ||||||
Domain | 1020-1106 | Fibronectin type-III 8 | ||||
Sequence: FAKNFHVKAVMKTSVLLSWEIPENYNSAMPFKILYDDGKMVEEVDGRATQKLIVNLKPEKSYSFVLTNRGNSAGGLQHRVTAKTAPD | ||||||
Region | 1298-1319 | Disordered | ||||
Sequence: ESRKSSLPNSKEVPSHHPTDPV | ||||||
Domain | 1357-1612 | Tyrosine-protein phosphatase 1 | ||||
Sequence: FSQEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVLLSAIEGIPGSDYVNANYIDGYRKQNAYIATQGSLPETFGDFWRMIWEQRSATVVMMTKLEERSRVKCDQYWPSRGTETHGLVQVTLLDTVELATYCVRTFALYKNGSSEKREVRQFQFTAWPDHGVPEHPTPFLAFLRRVKTCNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRAQRNYMVQTEDQYIFIHDALLEA | ||||||
Domain | 1644-1903 | Tyrosine-protein phosphatase 2 | ||||
Sequence: MELEFKRLASSKAHTSRFISANLPCNKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDQYQFCYRAALEY |
Sequence similarities
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence & Isoforms
- Sequence statusComplete
- Sequence processingThe displayed sequence is further processed into a mature form.
This entry describes 12 isoforms produced by Alternative splicing. Additional isoforms seem to exist.
Q64487-4
This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
- NameD
- Synonymsdelta
- Length1,912
- Mass (Da)214,410
- Last updated2012-05-16 v3
- ChecksumDEF494AA5A2CE814
Q64487-1
- NameC
Q64487-2
- NameA
- Differences from canonical
- 1-1: M → MCLTSCFILASHMLSCDLVFVP
- 2-230: Missing
- 608-1018: Missing
- 1019-1019: V → M
Q64487-3
- NameB
Q64487-5
- NameE
- Synonymsdelta-DelB
- Differences from canonical
- 227-230: Missing
Q64487-6
- NameF
- SynonymsdeltaA6
- Differences from canonical
- 181-183: Missing
Q64487-7
- NameG
- SynonymsdeltaA6-DelB
Q64487-8
- NameH
- SynonymsdeltaA3
- Differences from canonical
- 184-189: Missing
Q64487-9
- NameI
- SynonymsdeltaA3-DelB
Q64487-10
- NameJ
- Synonymsdelta-DelA
- Differences from canonical
- 181-189: Missing
Q64487-11
- NameK
- Synonymsdelta-DelAB
Q64487-12
- NameL
- Synonymsdelta A
- Differences from canonical
- 608-1018: Missing
- 1019-1019: V → M
Computationally mapped potential isoform sequences
There are 12 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
E9PVW8 | E9PVW8_MOUSE | Ptprd | 1506 | ||
E9Q7I7 | E9Q7I7_MOUSE | Ptprd | 1505 | ||
G3UYR6 | G3UYR6_MOUSE | Ptprd | 98 | ||
G3UYU6 | G3UYU6_MOUSE | Ptprd | 1495 | ||
G3UXU8 | G3UXU8_MOUSE | Ptprd | 271 | ||
G3UY75 | G3UY75_MOUSE | Ptprd | 1890 | ||
G3UWK6 | G3UWK6_MOUSE | Ptprd | 1505 | ||
G3UX60 | G3UX60_MOUSE | Ptprd | 1502 | ||
G3UX75 | G3UX75_MOUSE | Ptprd | 41 | ||
A0A1D5RLZ1 | A0A1D5RLZ1_MOUSE | Ptprd | 296 | ||
Q5SPA9 | Q5SPA9_MOUSE | Ptprd | 1254 | ||
B9EJA3 | B9EJA3_MOUSE | Ptprd | 1508 |
Sequence caution
Features
Showing features for alternative sequence, sequence conflict.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Alternative sequence | VSP_043545 | 1 | in isoform A and isoform B | |||
Sequence: M → MCLTSCFILASHMLSCDLVFVP | ||||||
Alternative sequence | VSP_043546 | 2-230 | in isoform A and isoform B | |||
Sequence: Missing | ||||||
Sequence conflict | 5 | in Ref. 1; BAA03004 | ||||
Sequence: A → R | ||||||
Alternative sequence | VSP_043548 | 181-183 | in isoform F and isoform G | |||
Sequence: Missing | ||||||
Alternative sequence | VSP_043547 | 181-189 | in isoform J and isoform K | |||
Sequence: Missing | ||||||
Alternative sequence | VSP_043549 | 184-189 | in isoform C, isoform H and isoform I | |||
Sequence: Missing | ||||||
Alternative sequence | VSP_043550 | 227-230 | in isoform C, isoform E, isoform G, isoform I and isoform K | |||
Sequence: Missing | ||||||
Sequence conflict | 349 | in Ref. 1; BAA03003 | ||||
Sequence: E → G | ||||||
Sequence conflict | 416 | in Ref. 1; BAA03003 | ||||
Sequence: A → T | ||||||
Sequence conflict | 551 | in Ref. 1; BAA03003 | ||||
Sequence: Y → D | ||||||
Sequence conflict | 588 | in Ref. 1; BAA03003 | ||||
Sequence: R → T | ||||||
Alternative sequence | VSP_043551 | 608-1018 | in isoform A and isoform L | |||
Sequence: Missing | ||||||
Sequence conflict | 657 | in Ref. 1; BAA03005 | ||||
Sequence: F → Y | ||||||
Sequence conflict | 663-666 | in Ref. 1; BAA03005 | ||||
Sequence: LGIP → IGNS | ||||||
Sequence conflict | 696 | in Ref. 1; BAA03005 | ||||
Sequence: G → W | ||||||
Sequence conflict | 761-763 | in Ref. 1; BAA03005 | ||||
Sequence: GQP → SA | ||||||
Alternative sequence | VSP_043552 | 775-783 | in isoform B and isoform C | |||
Sequence: Missing | ||||||
Sequence conflict | 822 | in Ref. 1; BAA03005 | ||||
Sequence: A → S | ||||||
Sequence conflict | 852 | in Ref. 1; BAA03005 | ||||
Sequence: Missing | ||||||
Sequence conflict | 1001 | in Ref. 1; BAA03005 | ||||
Sequence: G → R | ||||||
Sequence conflict | 1004 | in Ref. 1; BAA03005 | ||||
Sequence: P → A | ||||||
Alternative sequence | VSP_043553 | 1019 | in isoform A and isoform L | |||
Sequence: V → M | ||||||
Sequence conflict | 1046-1055 | in Ref. 1; BAA03003 | ||||
Sequence: SAMPFKILYD → PAILSKFFMMM | ||||||
Sequence conflict | 1084 | in Ref. 1; BAA03003 | ||||
Sequence: V → A | ||||||
Sequence conflict | 1298 | in Ref. 1; BAA03003 | ||||
Sequence: E → D | ||||||
Sequence conflict | 1447-1448 | in Ref. 1; BAA03003 | ||||
Sequence: RS → E | ||||||
Sequence conflict | 1491-1502 | in Ref. 1; BAA03003 | ||||
Sequence: ATYCVRTFALYK → HILCPDICTLN | ||||||
Sequence conflict | 1510 | in Ref. 1; BAA03003 | ||||
Sequence: E → K | ||||||
Sequence conflict | 1531-1542 | in Ref. 1; BAA03003 | ||||
Sequence: FLAFLRRVKTCN → VPSFLTESQNLH | ||||||
Sequence conflict | 1684 | in Ref. 1; BAA03003 | ||||
Sequence: T → G | ||||||
Sequence conflict | 1786-1795 | in Ref. 1; BAA03003 | ||||
Sequence: EFKVTDARDG → NSRSRMPGI |
Keywords
- Coding sequence diversity
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
D13903 EMBL· GenBank· DDBJ | BAA03003.1 EMBL· GenBank· DDBJ | mRNA | ||
D13905 EMBL· GenBank· DDBJ | BAA03005.1 EMBL· GenBank· DDBJ | mRNA | ||
D13904 EMBL· GenBank· DDBJ | BAA03004.1 EMBL· GenBank· DDBJ | mRNA | Different initiation | |
AF326559 EMBL· GenBank· DDBJ | AAL37405.1 EMBL· GenBank· DDBJ | mRNA | ||
AF326560 EMBL· GenBank· DDBJ | AAL37406.1 EMBL· GenBank· DDBJ | mRNA | ||
AL844848 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AL845517 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AL929181 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
Z23051 EMBL· GenBank· DDBJ | CAA80586.1 EMBL· GenBank· DDBJ | mRNA |