The transcriptional landscape of the mammalian genome.Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B.[...], Hayashizaki Y.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2)StrainC57BL/6JTissueEmbryo, TestisCategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCScience 309:1559-1563 (2005)Cited in99+16Mapped to99+
Lineage-specific biology revealed by a finished genome assembly of the mouse.Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L.[...], Ponting C.P.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainC57BL/6JCategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCPLoS Biol. 7:E1000112-E1000112 (2009)Cited in99+99+
No title available.Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.Cited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]CategorySequencesSourceUniProtKB reviewed (Swiss-Prot)Submission Submitted to EMBL/GenBank/DDBJ databases (JUL-2005)Cited in99+20
Mice lacking DYRK2 exhibit congenital malformations with lung hypoplasia and altered Foxf1 expression gradient.Yogosawa S., Ohkido M., Horii T., Okazaki Y., Nakayama J., Yoshida S., Toyokuni S., Hatada I., Morimoto M., Yoshida K.View abstractCategoriesFunction, Phenotypes & VariantsSourceMGI: 106676PubMedEurope PMCCommun Biol 4:1204-1204 (2021)Mapped to99+
The cellular and molecular landscape of hypothalamic patterning and differentiation from embryonic to late postnatal development.Kim D.W., Washington P.W., Wang Z.Q., Lin S.H., Sun C., Ismail B.T., Wang H., Jiang L., Blackshaw S.View abstractCategoriesFunction, ExpressionSourceMGI: 106676PubMedEurope PMCNat Commun 11:4360-4360 (2020)Mapped to99+
Molecular patterning of the embryonic cranial mesenchyme revealed by genome-wide transcriptional profiling.Dasgupta K., Chung J.U., Asam K., Jeong J.View abstractCategoryExpressionSourceMGI: 106676PubMedEurope PMCDev Biol 455:434-448 (2019)Mapped to99+
Transcriptional and epigenomic landscapes of CNS and non-CNS vascular endothelial cells.Sabbagh M.F., Heng J.S., Luo C., Castanon R.G., Nery J.R., Rattner A., Goff L.A., Ecker J.R., Nathans J.View abstractCategoriesFunction, ExpressionSourceMGI: 106676PubMedEurope PMCElife 7:e36187-e36187 (2018)Mapped to62
The DNA Methyltransferase 1 (DNMT1) Controls the Shape and Dynamics of Migrating POA-Derived Interneurons Fated for the Murine Cerebral Cortex.Pensold D., Symmank J., Hahn A., Lingner T., Salinas-Riester G., Downie B.R., Ludewig F., Rotzsch A., Haag N.[...], Zimmer G.View abstractCategoryFunctionSourceMGI: 106676PubMedEurope PMCCereb Cortex 27:5696-5714 (2017)Mapped to99+
T-box3 is a ciliary protein and regulates stability of the Gli3 transcription factor to control digit number.Emechebe U., Kumar P P., Rozenberg J.M., Moore B., Firment A., Mirshahi T., Moon A.M.View abstractCategoryFunctionSourceMGI: 106676PubMedEurope PMCElife 5:e07897-e07897 (2016)Mapped to99+
Transcriptome of the inner circular smooth muscle of the developing mouse intestine: Evidence for regulation of visceral smooth muscle genes by the hedgehog target gene, cJun.Gurdziel K., Vogt K.R., Walton K.D., Schneider G.K., Gumucio D.L.View abstractCategoryExpressionSourceMGI: 106676PubMedEurope PMCDev Dyn 245:614-626 (2016)Mapped to99+
Spatiotemporal regulation of GLI target genes in the mammalian limb bud.Lewandowski J.P., Du F., Zhang S., Powell M.B., Falkenstein K.N., Ji H., Vokes S.A.View abstractCategoryFunctionSourceMGI: 106676PubMedEurope PMCDev Biol 406:92-103 (2015)Mapped to99+
Lack of CUL4B leads to increased abundance of GFAP-positive cells that is mediated by PTGDS in mouse brain.Zhao W., Jiang B., Hu H., Zhang S., Lv S., Yuan J., Qian Y., Zou Y., Li X.[...], Gong Y.View abstractCategoryExpressionSourceMGI: 106676PubMedEurope PMCHum Mol Genet 24:4686-4697 (2015)Mapped to67
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain.Thompson C.L., Ng L., Menon V., Martinez S., Lee C.K., Glattfelder K., Sunkin S.M., Henry A., Lau C.[...], Jones A.R.View abstractCategoriesSequences, ExpressionSourceMGI: 106676PubMedEurope PMCNeuron 83:309-323 (2014)Mapped to99+
A direct physical interaction between Nanog and Sox2 regulates embryonic stem cell self-renewal.Gagliardi A., Mullin N.P., Ying Tan Z., Colby D., Kousa A.I., Halbritter F., Weiss J.T., Felker A., Bezstarosti K.[...], Chambers I.View abstractCategoryInteractionSourceIntAct: Q62521PubMedEurope PMCEMBO J 32:2231-2247 (2013)Mapped to99+
Specification of dopaminergic subsets involves interplay of En1 and Pitx3.Veenvliet J.V., Dos Santos M.T., Kouwenhoven W.M., von Oerthel L., Lim J.L., van der Linden A.J., Koerkamp M.J., Holstege F.C., Smidt M.P.View abstractCategoryFunctionSourceMGI: 106676PubMedEurope PMCDevelopment 140:3373-3384 (2013)Mapped to99+
Interaction between DMRT1 function and genetic background modulates signaling and pluripotency to control tumor susceptibility in the fetal germ line.Krentz A.D., Murphy M.W., Zhang T., Sarver A.L., Jain S., Griswold M.D., Bardwell V.J., Zarkower D.View abstractCategoryFunctionSourceMGI: 106676PubMedEurope PMCDev Biol 377:67-78 (2013)Mapped to82
Transcriptional regulatory networks in epiblast cells and during anterior neural plate development as modeled in epiblast stem cells.Iwafuchi-Doi M., Matsuda K., Murakami K., Niwa H., Tesar P.J., Aruga J., Matsuo I., Kondoh H.View abstractCategoryExpressionSourceMGI: 106676PubMedEurope PMCDevelopment 139:3926-3937 (2012)Mapped to99+
Fibroblast growth factor 8 organizes the neocortical area map and regulates sensory map topography.Assimacopoulos S., Kao T., Issa N.P., Grove E.A.View abstractCategoryExpressionSourceMGI: 106676PubMedEurope PMCJ Neurosci 32:7191-7201 (2012)Mapped to68
Deterministic and stochastic allele specific gene expression in single mouse blastomeres.Tang F., Barbacioru C., Nordman E., Bao S., Lee C., Wang X., Tuch B.B., Heard E., Lao K., Surani M.A.View abstractCategoriesSequences, ExpressionSourceMGI: 106676PubMedEurope PMCPLoS One 6:e21208-e21208 (2011)Mapped to99+
A conditional knockout resource for the genome-wide study of mouse gene function.Skarnes W.C., Rosen B., West A.P., Koutsourakis M., Bushell W., Iyer V., Mujica A.O., Thomas M., Harrow J.[...], Bradley A.View abstractCategoriesFunction, Phenotypes & VariantsSourceMGI: 106676PubMedEurope PMCNature 474:337-342 (2011)Mapped to99+
Development, maturation, and necessity of transcription factors in the mouse suprachiasmatic nucleus.VanDunk C., Hunter L.A., Gray P.A.View abstractCategoryExpressionSourceMGI: 106676PubMedEurope PMCJ Neurosci 31:6457-6467 (2011)Mapped to99+
A high-resolution anatomical atlas of the transcriptome in the mouse embryo.Diez-Roux G., Banfi S., Sultan M., Geffers L., Anand S., Rozado D., Magen A., Canidio E., Pagani M.[...], Ballabio A.View abstractCategoryExpressionSourceMGI: 106676PubMedEurope PMCPLoS Biol 9:e1000582-e1000582 (2011)Mapped to99+
A genomic atlas of mouse hypothalamic development.Shimogori T., Lee D.A., Miranda-Angulo A., Yang Y., Wang H., Jiang L., Yoshida A.C., Kataoka A., Mashiko H.[...], Blackshaw S.View abstractCategoryExpressionSourceMGI: 106676PubMedEurope PMCNat Neurosci 13:767-775 (2010)Mapped to99+
A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58.Yokoyama S., Ito Y., Ueno-Kudoh H., Shimizu H., Uchibe K., Albini S., Mitsuoka K., Miyaki S., Kiso M.[...], Asahara H.View abstractCategoryFunctionSourceMGI: 106676PubMedEurope PMCDev. Cell 17:836-848 (2009)Cited in1Mapped to99+
The DM domain protein DMRT1 is a dose-sensitive regulator of fetal germ cell proliferation and pluripotency.Krentz A.D., Murphy M.W., Kim S., Cook M.S., Capel B., Zhu R., Matin A., Sarver A.L., Parker K.L.[...], Zarkower D.View abstractCategoryFunctionSourceMGI: 106676PubMedEurope PMCProc. Natl. Acad. Sci. U.S.A. 106:22323-22328 (2009)Cited in1Mapped to99+