Q5Z6A4 · HFA6A_ORYSJ
- ProteinPutative heat stress transcription factor A-6a
- GeneHSFA6A
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids331 (go to sequence)
- Protein existenceInferred from homology
- Annotation score3/5
Function
function
Transcriptional regulator that specifically binds DNA of heat shock promoter elements (HSE).
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | cytoplasm | |
Cellular Component | nucleus | |
Molecular Function | DNA-binding transcription factor activity | |
Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | |
Biological Process | cellular response to heat | |
Biological Process | regulation of transcription by RNA polymerase II |
Keywords
- Molecular function
- Biological process
Names & Taxonomy
Protein names
- Recommended namePutative heat stress transcription factor A-6a
- Alternative names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa
Accessions
- Primary accessionQ5Z6A4
- Secondary accessions
Proteomes
Genome annotation databases
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000350830 | 1-331 | Putative heat stress transcription factor A-6a | |||
Sequence: MDYSTVKQEEVEVVVLDGEEEAAAAAAPVPLPAAMGVGAAVAPFLVKTFEMVEDPATDAVVSWGGAARNSFVVWDPHAFAAGLLPLHFKHANFSSFLRQLNTYGFRKVSADRWEFANEDFLGGQRHLLANIRRRRRGAGTGSTTPRAVNCGGGGGEGEVERLRRDKEALARELARLRRQQQEARAQLLDMERRVRGTERRQEQCTEFLARALRSPDVLDNIARRHAAAVERKKRRMLAAAADDDGLTFEALALAAAADTSHSTGGAVTTDMIWYELLGEEQAEIDIEVDQLVASASAAADTASEAEPWEEMGEEEVQELVQQIDCLASPSS |
Post-translational modification
Exhibits temperature-dependent phosphorylation.
Keywords
- PTM
Proteomic databases
Interaction
Structure
Family & Domains
Features
Showing features for region, coiled coil, motif.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 135-160 | Disordered | ||||
Sequence: RRGAGTGSTTPRAVNCGGGGGEGEVE | ||||||
Coiled coil | 156-238 | |||||
Sequence: EGEVERLRRDKEALARELARLRRQQQEARAQLLDMERRVRGTERRQEQCTEFLARALRSPDVLDNIARRHAAAVERKKRRMLA | ||||||
Region | 162-212 | Hydrophobic repeat HR-A/B | ||||
Sequence: LRRDKEALARELARLRRQQQEARAQLLDMERRVRGTERRQEQCTEFLARAL | ||||||
Motif | 230-235 | Nuclear localization signal | ||||
Sequence: ERKKRR | ||||||
Motif | 246-253 | Nuclear export signal | ||||
Sequence: LTFEALAL | ||||||
Motif | 270-279 | AHA1 | ||||
Sequence: DMIWYELLGE | ||||||
Motif | 305-313 | AHA2 | ||||
Sequence: AEPWEEMGE |
Domain
The hydrophobic-rich region (HR-A/B) corresponds to the oligomerization domain. AHA motifs are transcriptional activator elements.
Sequence similarities
Belongs to the HSF family. Class A subfamily.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length331
- Mass (Da)36,103
- Last updated2004-11-23 v1
- Checksum99A2C47AB01251E0
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AP005456 EMBL· GenBank· DDBJ | BAD54487.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AP008212 EMBL· GenBank· DDBJ | BAF19803.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AP014962 EMBL· GenBank· DDBJ | BAS98278.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CM000143 EMBL· GenBank· DDBJ | EAZ37390.1 EMBL· GenBank· DDBJ | Genomic DNA |