The genome sequence of Drosophila melanogaster.Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A.[...], Venter J.C.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategoriesSequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCScience 287:2185-2195 (2000)Cited in99+99+Mapped to9
Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A., Patel S., Adams M., Champe M., Dugan S.P.[...], Rubin G.M.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategoriesSequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCGenome Biol. 3:RESEARCH0079-RESEARCH0079 (2002)Cited in299+Mapped to12
Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H.[...], Lewis S.E.View abstractCited forGENOME REANNOTATIONStrainBerkeleyCategoriesSequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCGenome Biol. 3:RESEARCH0083.1-RESEARCH0083.22 (2002)Cited in99+99+Mapped to25
The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J.W., Svirskas R., Patel S., Frise E., Wheeler D.A., Lewis S.E.[...], Celniker S.E.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategoriesSequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCGenome Biol. 3:RESEARCH0084.1-RESEARCH0084.20 (2002)Cited in399+
Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A., Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A.[...], Karpen G.H.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategoriesSequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCGenome Biol 3:RESEARCH0085-RESEARCH0085 (2002)Cited in99+Mapped to8
Modeling mitochondrial biogenesis in Drosophila: The NRG element is a PAR-domain protein 1 target.Sardiello M., Tripoli G., Romito A., Minervini C., Viggiano L., Pesole G., Caggese C.Cited forNUCLEOTIDE SEQUENCECategoriesSequencesSourceUniProtKB unreviewed (TrEMBL)Submission Submitted to EMBL/GenBank/DDBJ databases (OCT-2004)Cited in1
Combined evidence annotation of transposable elements in genome sequences.Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D., Ashburner M., Anxolabehere D.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategoriesSequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCPLoS Comput Biol 1:166-175 (2005)Cited in99+
No title available.Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S., Svirskas R., Rubin G.Cited forNUCLEOTIDE SEQUENCECategoriesSequencesSourceUniProtKB unreviewed (TrEMBL)Submission Submitted to EMBL/GenBank/DDBJ databases (AUG-2006)Cited in399+
The Release 5.1 annotation of Drosophila melanogaster heterochromatin.Smith C.D., Shu S., Mungall C.J., Karpen G.H.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategoriesSequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCScience 316:1586-1591 (2007)Cited in99+Mapped to2
Sequence finishing and mapping of Drosophila melanogaster heterochromatin.Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M., Frise E., Wan K.H., Park S., Mendez-Lago M.[...], Celniker S.E.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategoriesSequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCScience 316:1625-1628 (2007)Cited in199+
Gene Model Annotations for Drosophila melanogaster: Impact of High- Throughput Data.FlyBase ConsortiumMatthews B.B., Dos Santos G., Crosby M.A., Emmert D.B., St Pierre S.E., Gramates L.S., Zhou P., Schroeder A.J., Falls K.[...], Gelbart W.M.View abstractCited forNUCLEOTIDE SEQUENCECategoriesSequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCG3 (Bethesda) 5:1721-1736 (2015)Cited in99+Mapped to99+
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.FlyBase ConsortiumCrosby M.A., Gramates L.S., Dos Santos G., Matthews B.B., St Pierre S.E., Zhou P., Schroeder A.J., Falls K., Emmert D.B.[...], Gelbart W.M.View abstractCited forNUCLEOTIDE SEQUENCECategoriesSequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCG3 (Bethesda) 5:1737-1749 (2015)Cited in99+Mapped to99+
The Release 6 reference sequence of the Drosophila melanogaster genome.Hoskins R.A., Carlson J.W., Wan K.H., Park S., Mendez I., Galle S.E., Booth B.W., Pfeiffer B.D., George R.A.[...], Celniker S.E.View abstractCited forNUCLEOTIDE SEQUENCECategoriesSequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCGenome Res 25:445-458 (2015)Cited in99+Mapped to24
Drosophila melanogaster release 4 sequence.Berkeley Drosophila Genome ProjectCelniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R., Hoskins R., Stapleton M., Pacleb J.[...], Rubin G.Cited forNUCLEOTIDE SEQUENCECategoriesSequencesSourceUniProtKB unreviewed (TrEMBL)Submission Submitted to EMBL/GenBank/DDBJ databases (NOV-2022)Cited in199+
No title available.FlyBaseCited forNUCLEOTIDE SEQUENCECategoriesSequencesSourceUniProtKB unreviewed (TrEMBL)Submission Submitted to EMBL/GenBank/DDBJ databases (NOV-2022)Cited in99+
PDP1, a novel Drosophila PAR domain bZIP transcription factor expressed in developing mesoderm, endoderm and ectoderm, is a transcriptional regulator of somatic muscle genes.Lin S.C., Lin M.H., Horvath P., Reddy K.L., Storti R.V.View abstractCategoriesSequencesSourceFlyBase: FBgn0016694PubMedEurope PMCDevelopment 124:4685-4696 (1997)Cited in6Mapped to17
Clock-dependent chromatin accessibility rhythms regulate circadian transcription.Yuan Y., Chen Q., Brovkina M., Clowney E.J., Yadlapalli S.View abstractSourceFlyBase: FBgn0016694PubMedEurope PMCPLoS Genet 20:e1011278-e1011278 (2024)Mapped to29
Timeless noncoding DNA contains cell-type preferential enhancers important for proper Drosophila circadian regulation.Ma D., Ojha P., Yu A.D., Araujo M.S., Luo W., Keefer E., Diaz M.M., Wu M., Joiner W.J.[...], Rosbash M.View abstractSourceFlyBase: FBgn0016694PubMedEurope PMCProc Natl Acad Sci U S A 121:e2321338121-e2321338121 (2024)Mapped to24
The emergence of circadian timekeeping in the intestine.Parasram K., Zuccato A., Shin M., Willms R., DeVeale B., Foley E., Karpowicz P.View abstractSourceFlyBase: FBgn0016694PubMedEurope PMCNat Commun 15:1788-1788 (2024)Mapped to82
Construction of single-cell cross-species chromatin accessibility landscapes with combinatorial-hybridization-based ATAC-seq.Zhang G., Fu Y., Yang L., Ye F., Zhang P., Zhang S., Ma L., Li J., Wu H.[...], Guo G.View abstractSourceFlyBase: FBgn0016694PubMedEurope PMCDev Cell 59:793-811.e8 (2024)Mapped to99+
TARANIS Interacts with VRILLE and PDP1 to Modulate the Circadian Transcriptional Feedback Mechanism in <i>Drosophila</i>.Akpoghiran O., Afonso D.J.S., Zhang Y., Koh K.View abstractSourceFlyBase: FBgn0016694PubMedEurope PMCJ Neurosci 44:e0922232023-e0922232023 (2024)Mapped to22
A Drosophila screen identifies a role for histone methylation in ER stress preconditioning.Owings K.G., Chow C.Y.View abstractSourceFlyBase: FBgn0016694PubMedEurope PMCG3 (Bethesda) 14:jkad265-jkad265 (2024)Mapped to99+
Characterization of clock-related proteins and neuropeptides in Drosophila littoralis and their putative role in diapause.Manoli G., Zandawala M., Yoshii T., Helfrich-Forster C.View abstractSourceFlyBase: FBgn0016694PubMedEurope PMCJ Comp Neurol 531:1525-1549 (2023)Mapped to33
Generation of LexA enhancer-trap lines in Drosophila by an international scholastic network.Kim E.S., Rajan A., Chang K., Govindarajan S., Gulick C., English E., Rodriguez B., Bloomfield O., Nakada S.[...], Kockel L.View abstractSourceFlyBase: FBgn0016694PubMedEurope PMCG3 (Bethesda) 13:jkad124-jkad124 (2023)Mapped to99+
Mapping genomic regulation of kidney disease and traits through high- resolution and interpretable eQTLs.Han S.K., McNulty M.T., Benway C.J., Wen P., Greenberg A., Onuchic-Whitford A.C., Jang D., Flannick J., Burtt N.P.[...], Sampson M.G.View abstractSourceFlyBase: FBgn0016694PubMedEurope PMCNat Commun 14:2229-2229 (2023)Mapped to69