Comparative analysis of ribosomal protein L5 sequences from bacteria of the genus Thermus.Jahn O., Hartmann R.K., Boeckh T., Erdmann V.A.View abstractCited forNUCLEOTIDE SEQUENCE [GENOMIC DNA]CategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCBiochimie 73:669-678 (1991)Cited in3
Complete genome sequence of Thermus thermophilus HB8.Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.Cited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainATCC 27634 / DSM 579 / HB8CategorySequencesSourceUniProtKB reviewed (Swiss-Prot)Submission Submitted to EMBL/GenBank/DDBJ databases (NOV-2004)Cited in99+99+
Identification, purification and partial sequence of four Thermus thermophilus 5S rRNA binding proteins.Kim J.-S., Boysen R.I., Schroeder W., Erdmann V.A., Gessner R.V.Cited forPROTEIN SEQUENCE OF 2-44, ISOLATION OF 5S RRNA-ASSOCIATED COMPLEXESCategoriesSequences, InteractionSourceUniProtKB reviewed (Swiss-Prot)Endocyt. Cell Res. 11:177-194 (1996)Cited in3
The isolation and complete amino acid sequence of the ribosomal protein L36 from Thermus thermophilus and its zinc-binding motif.Boysen R.I., Lorenz S., Kim J.S., Schroeder W.F.K.J., Erdmann V.A.Cited forPROTEIN SEQUENCE OF 2-41CategorySequencesSourceUniProtKB reviewed (Swiss-Prot)Endocyt. Cell Res. 11:41-58 (1995)Cited in9
Identification of the 50S ribosomal proteins from the eubacterium Thermus thermophilus.Katsani K.R., Tsiboli P., Anagnostopoulos K., Urlaub H., Choli-Papadopoulou T.View abstractCited forPROTEIN SEQUENCE OF 2-28StrainATCC 27634 / DSM 579 / HB8CategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCBiol. Chem. 381:1079-1087 (2000)Cited in32
Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.Suh M.-J., Hamburg D.M., Gregory S.T., Dahlberg A.E., Limbach P.A.View abstractCited forMASS SPECTROMETRYStrainATCC 27634 / DSM 579 / HB8CategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCProteomics 5:4818-4831 (2005)Cited in53
The path of messenger RNA through the ribosome.Yusupova G.Z., Yusupov M.M., Cate J.H.D., Noller H.F.View abstractCited forX-RAY CRYSTALLOGRAPHY (5.0 ANGSTROMS) OF THE RIBOSOMECategoryStructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCCell 106:233-241 (2001)Cited in41
Crystal structure of the ribosome at 5.5 A resolution.Yusupov M.M., Yusupova G.Z., Baucom A., Lieberman K., Earnest T.N., Cate J.H.D., Noller H.F.View abstractCited forX-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE RIBOSOME, INTERSUBUNIT BRIDGE FORMATIONCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCScience 292:883-896 (2001)Cited in471Mapped to17
Insights into translational termination from the structure of RF2 bound to the ribosome.Weixlbaumer A., Jin H., Neubauer C., Voorhees R.M., Petry S., Kelley A.C., Ramakrishnan V.View abstractCited forX-RAY CRYSTALLOGRAPHY (3.45 ANGSTROMS) OF 70S RIBOSOME IN COMPLEX WITH RF2, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCScience 322:953-956 (2008)Cited in51Mapped to1
Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.Jin H., Kelley A.C., Loakes D., Ramakrishnan V.View abstractCited forX-RAY CRYSTALLOGRAPHY (3.10 ANGSTROMS) OF 70S RIBOSOME IN COMPLEX WITH RF2, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCProc. Natl. Acad. Sci. U.S.A. 107:8593-8598 (2010)Cited in52
Macrolones target bacterial ribosomes and DNA gyrase and can evade resistance mechanisms.Aleksandrova E.V., Ma C.X., Klepacki D., Alizadeh F., Vazquez-Laslop N., Liang J.H., Polikanov Y.S., Mankin A.S.View abstractCategoryStructureSourcePDB: 8VTU, PDB: 8VTV, PDB: 8VTW, PDB: 8VTX, PDB: 8VTYPubMedEurope PMCNat Chem Biol 0:0-0 (2024)Mapped to50
Berberine analog of chloramphenicol exhibits a distinct mode of action and unveils ribosome plasticity.Batool Z., Pavlova J.A., Paranjpe M.N., Tereshchenkov A.G., Lukianov D.A., Osterman I.A., Bogdanov A.A., Sumbatyan N.V., Polikanov Y.S.View abstractCategoryStructureSourcePDB: 9B00PubMedEurope PMCStructure 32:1429-1442.e6 (2024)Mapped to49
An antibiotic preorganized for ribosomal binding overcomes antimicrobial resistance.Wu K.J.Y., Tresco B.I.C., Ramkissoon A., Aleksandrova E.V., Syroegin E.A., See D.N.Y., Liow P., Dittemore G.A., Yu M.[...], Myers A.G.View abstractCategoryStructureSourcePDB: 8UD6, PDB: 8UD7, PDB: 8UD8PubMedEurope PMCScience 383:721-726 (2024)Mapped to49
Structural basis of Cfr-mediated antimicrobial resistance and mechanisms to evade it.Aleksandrova E.V., Wu K.J.Y., Tresco B.I.C., Syroegin E.A., Killeavy E.E., Balasanyants S.M., Svetlov M.S., Gregory S.T., Atkinson G.C.[...], Polikanov Y.S.View abstractCategoryStructureSourcePDB: 8G29, PDB: 8G2A, PDB: 8G2B, PDB: 8G2C, PDB: 8G2DPubMedEurope PMCNat Chem Biol 20:867-876 (2024)Mapped to49
Development of 2nd generation aminomethyl spectinomycins that overcome native efflux in <i>Mycobacterium</i> abscessus.Phelps G.A., Cheramie M.N., Fernando D.M., Selchow P., Meyer C.J., Waidyarachchi S.L., Dharuman S., Liu J., Meuli M.[...], Lee R.E.View abstractCategoryStructureSourcePDB: 8UVR, PDB: 8UVSPubMedEurope PMCProc Natl Acad Sci U S A 121:e2314101120-e2314101120 (2024)Mapped to49
Molecular basis of the pleiotropic effects by the antibiotic amikacin on the ribosome.Seely S.M., Parajuli N.P., De Tarafder A., Ge X., Sanyal S., Gagnon M.G.View abstractCategoryStructureSourcePDB: 8EV6, PDB: 8EV7PubMedEurope PMCNat Commun 14:4666-4666 (2023)Mapped to98
Structural insights into the mechanism of overcoming Erm-mediated resistance by macrolides acting together with hygromycin-A.Chen C.W., Leimer N., Syroegin E.A., Dunand C., Bulman Z.P., Lewis K., Polikanov Y.S., Svetlov M.S.View abstractCategoryStructureSourcePDB: 8FC1, PDB: 8FC2, PDB: 8FC3, PDB: 8FC4, PDB: 8FC5, PDB: 8FC6PubMedEurope PMCNat Commun 14:4196-4196 (2023)Mapped to50
Practical Synthesis of <i>N</i>-Formylmethionylated Peptidyl-tRNA Mimics.Thaler J., Syroegin E.A., Breuker K., Polikanov Y.S., Micura R.View abstractCategoryStructureSourcePDB: 8T8B, PDB: 8T8CPubMedEurope PMCACS Chem Biol 18:2233-2239 (2023)Mapped to50
Structural basis for reduced ribosomal A-site fidelity in response to P- site codon-anticodon mismatches.Nguyen H.A., Hoffer E.D., Fagan C.E., Maehigashi T., Dunham C.M.View abstractCategoryStructureSourcePDB: 8FOM, PDB: 8FONPubMedEurope PMCJ Biol Chem 299:104608-104608 (2023)Mapped to49
Discovery of natural-product-derived sequanamycins as potent oral anti- tuberculosis agents.Zhang J., Lair C., Roubert C., Amaning K., Barrio M.B., Benedetti Y., Cui Z., Xing Z., Li X.[...], Lagrange S.View abstractCategoryStructureSourcePDB: 7AZO, PDB: 7AZSPubMedEurope PMCCell 186:1013-1025.e24 (2023)Cited in2Mapped to94
Insights into the molecular mechanism of translation inhibition by the ribosome-targeting antibiotic thermorubin.Paranjpe M.N., Marina V.I., Grachev A.A., Maviza T.P., Tolicheva O.A., Paleskava A., Osterman I.A., Sergiev P.V., Konevega A.L.[...], Gagnon M.G.View abstractCategoryStructureSourcePDB: 8EKBPubMedEurope PMCNucleic Acids Res 51:449-462 (2023)Mapped to98
Insights into the ribosome function from the structures of non-arrested ribosome-nascent chain complexes.Syroegin E.A., Aleksandrova E.V., Polikanov Y.S.View abstractCategoryStructureSourcePDB: 8CVJ, PDB: 8CVK, PDB: 8CVLPubMedEurope PMCNat Chem 15:143-153 (2023)Mapped to49
Structural basis for the inability of chloramphenicol to inhibit peptide bond formation in the presence of A-site glycine.Syroegin E.A., Aleksandrova E.V., Polikanov Y.S.View abstractCategoryStructureSourcePDB: 7U2H, PDB: 7U2I, PDB: 7U2JPubMedEurope PMCNucleic Acids Res 50:7669-7679 (2022)Mapped to49
Structural basis for the context-specific action of the classic peptidyl transferase inhibitor chloramphenicol.Syroegin E.A., Flemmich L., Klepacki D., Vazquez-Laslop N., Micura R., Polikanov Y.S.View abstractCategoryStructureSourcePDB: 7RQA, PDB: 7RQB, PDB: 7RQC, PDB: 7RQD, PDB: 7RQEPubMedEurope PMCNat Struct Mol Biol 29:152-161 (2022)Mapped to50
A synthetic antibiotic class overcoming bacterial multidrug resistance.Mitcheltree M.J., Pisipati A., Syroegin E.A., Silvestre K.J., Klepacki D., Mason J.D., Terwilliger D.W., Testolin G., Pote A.R.[...], Myers A.G.View abstractCategoryStructureSourcePDB: 7RQ8, PDB: 7RQ9PubMedEurope PMCNature 599:507-512 (2021)Mapped to49