Q5L0S4 · Q5L0S4_GEOKA
- ProteinPeptide deformylase
- Genedef
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids157 (go to sequence)
- Protein existenceInferred from homology
- Annotation score2/5
Function
function
Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
Catalytic activity
- N-terminal N-formyl-L-methionyl-[peptide] + H2O = N-terminal L-methionyl-[peptide] + formate
Cofactor
Note: Binds 1 Fe2+ ion.
Features
Showing features for binding site, active site.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Binding site | 90 | Fe cation (UniProtKB | ChEBI) | |||
Binding site | 132 | Fe cation (UniProtKB | ChEBI) | |||
Active site | 133 | ||||
Binding site | 136 | Fe cation (UniProtKB | ChEBI) | |||
GO annotations
Aspect | Term | |
---|---|---|
Molecular Function | metal ion binding | |
Molecular Function | peptide deformylase activity | |
Biological Process | peptidyl-methionine modification | |
Biological Process | translation |
Keywords
- Molecular function
- Biological process
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended namePeptide deformylase
- EC number
- Short namesPDF
- Alternative names
Gene names
Organism names
- Strain
- Taxonomic lineageBacteria > Bacillota > Bacilli > Bacillales > Bacillaceae > Geobacillus > Geobacillus thermoleovorans group
Accessions
- Primary accessionQ5L0S4
Proteomes
Interaction
Protein-protein interaction databases
Structure
Sequence
- Sequence statusComplete
- Length157
- Mass (Da)17,227
- Last updated2005-02-01 v1
- MD5 Checksum9ECA06995B6F5069851D7DA0D84BB198
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
BA000043 EMBL· GenBank· DDBJ | BAD75456.1 EMBL· GenBank· DDBJ | Genomic DNA |