Q5GAB7 · Q5GAB7_9TRAC
- ProteinKNOTTED1-like protein
- GeneKNOX1
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids460 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score2/5
Function
Features
Showing features for dna binding.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
DNA binding | 377-440 | Homeobox; TALE-type | ||||
Sequence: LKKKKKGKLPKDSRQILLNWWSVHYKWPYPSESEKASLAESTGLDQKQINNWFINQRKRHWKPS |
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | nucleus | |
Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | |
Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
Keywords
- Molecular function
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Organism
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Lycopodiopsida > Selaginellales > Selaginellaceae > Selaginella
Accessions
- Primary accessionQ5GAB7
Subcellular Location
Structure
Family & Domains
Features
Showing features for compositional bias, region, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-24 | Polar residues | ||||
Sequence: MELRGRRSTSQSPASTQDSTEVSM | ||||||
Region | 1-38 | Disordered | ||||
Sequence: MELRGRRSTSQSPASTQDSTEVSMEQHLPPPRHPHPQQ | ||||||
Region | 52-84 | Disordered | ||||
Sequence: SNAHHHHLGSTSSMPPHQEQQQNPYRPSAAGEH | ||||||
Compositional bias | 57-81 | Polar residues | ||||
Sequence: HHLGSTSSMPPHQEQQQNPYRPSAA | ||||||
Region | 320-343 | Disordered | ||||
Sequence: VTSVESDDRNEAYDSSEDEDSGAE | ||||||
Domain | 356-376 | ELK | ||||
Sequence: ELKEQLMRKYSGYISSLKHEF | ||||||
Domain | 376-439 | Homeobox | ||||
Sequence: FLKKKKKGKLPKDSRQILLNWWSVHYKWPYPSESEKASLAESTGLDQKQINNWFINQRKRHWKP | ||||||
Region | 440-460 | Disordered | ||||
Sequence: SDELTALSGQPSQSTEASSGS | ||||||
Compositional bias | 444-460 | Polar residues | ||||
Sequence: TALSGQPSQSTEASSGS |
Sequence similarities
Belongs to the TALE/KNOX homeobox family.
Keywords
- Domain
Family and domain databases
Sequence
- Sequence statusComplete
- Length460
- Mass (Da)51,440
- Last updated2005-03-01 v1
- Checksum9203C3EECDE01DBF
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-24 | Polar residues | ||||
Sequence: MELRGRRSTSQSPASTQDSTEVSM | ||||||
Compositional bias | 57-81 | Polar residues | ||||
Sequence: HHLGSTSSMPPHQEQQQNPYRPSAA | ||||||
Compositional bias | 444-460 | Polar residues | ||||
Sequence: TALSGQPSQSTEASSGS |