Q5DU00 · DCDC2_MOUSE
- ProteinDoublecortin domain-containing protein 2
- GeneDcdc2
- StatusUniProtKB reviewed (Swiss-Prot)
- Organism
- Amino acids475 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score5/5
Function
function
Protein that plays a role in the inhibition of canonical Wnt signaling pathway (By similarity).
May be involved in neuronal migration during development of the cerebral neocortex (By similarity).
Involved in the control of ciliogenesis and ciliary length (By similarity).
May be involved in neuronal migration during development of the cerebral neocortex (By similarity).
Involved in the control of ciliogenesis and ciliary length (By similarity).
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | axoneme | |
Cellular Component | cilium | |
Cellular Component | cytoplasm | |
Cellular Component | kinocilium | |
Cellular Component | synapse | |
Biological Process | cilium assembly | |
Biological Process | dendrite morphogenesis | |
Biological Process | intracellular signal transduction | |
Biological Process | neuron migration | |
Biological Process | neuronal action potential | |
Biological Process | regulation of cilium assembly | |
Biological Process | regulation of Wnt signaling pathway | |
Biological Process | sensory perception of sound | |
Biological Process | synaptic transmission, glutamatergic | |
Biological Process | visual learning |
Keywords
- Biological process
Names & Taxonomy
Protein names
- Recommended nameDoublecortin domain-containing protein 2
Gene names
Organism names
- Organism
- Strain
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Glires > Rodentia > Myomorpha > Muroidea > Muridae > Murinae > Mus > Mus
Accessions
- Primary accessionQ5DU00
- Secondary accessions
Proteomes
Organism-specific databases
Subcellular Location
UniProt Annotation
GO Annotation
Note: Localizes to the ciliary axoneme and to mitotic spindle fibers in a cell-cycle-dependent manner.
Keywords
- Cellular component
Phenotypes & Variants
Disruption phenotype
Animals develop periportal hepatic fibrosis with biliary duct proliferation at age 11 months.
PTM/Processing
Features
Showing features for chain, modified residue.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000079805 | 1-475 | Doublecortin domain-containing protein 2 | |||
Sequence: MNGPSSRSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVFLKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIESGGNYVAGGPEAFKKLNYLDIGEIKKRPMEAVNTEVKPVIHSRINVSARFRKSLHEPCTIFLIANGDLISPASRLLIPKKALNQWDHVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKRLPYSELLFDKSAMRRPYGQKASSLPPMVGSRKSKGSGNYRQSKSTIGSSDNSSPQPLKRKGKKDSNSEKPTKVKQSVKSKTSHQAIPDNGEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKTSKDANQKEDFSAMNGETEDRGGSKAAGTSEQEEGIPDHGEKKSSPSRVNGGTDEENGEELDQVAEELQPTEDEKGKAEGDNSGQDEAGLDAQRPPRPEVTVTSPQENEENEANKASSAVA | ||||||
Modified residue | 270 | Phosphoserine | ||||
Sequence: S |
Keywords
- PTM
Proteomic databases
PTM databases
Expression
Tissue specificity
Expressed in hair cells of the inner ear.
Gene expression databases
Structure
Family & Domains
Features
Showing features for domain, region, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 17-100 | Doublecortin 1 | ||||
Sequence: KSVLVYRNGDPFFAGRRVVIHEKKVSSFDVFLKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIESGGNYVAGGPEAFKKLNYL | ||||||
Domain | 139-221 | Doublecortin 2 | ||||
Sequence: CTIFLIANGDLISPASRLLIPKKALNQWDHVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKRLPYS | ||||||
Region | 234-475 | Disordered | ||||
Sequence: YGQKASSLPPMVGSRKSKGSGNYRQSKSTIGSSDNSSPQPLKRKGKKDSNSEKPTKVKQSVKSKTSHQAIPDNGEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKTSKDANQKEDFSAMNGETEDRGGSKAAGTSEQEEGIPDHGEKKSSPSRVNGGTDEENGEELDQVAEELQPTEDEKGKAEGDNSGQDEAGLDAQRPPRPEVTVTSPQENEENEANKASSAVA | ||||||
Compositional bias | 251-272 | Polar residues | ||||
Sequence: KGSGNYRQSKSTIGSSDNSSPQ | ||||||
Compositional bias | 273-292 | Basic and acidic residues | ||||
Sequence: PLKRKGKKDSNSEKPTKVKQ | ||||||
Compositional bias | 312-361 | Basic and acidic residues | ||||
Sequence: KAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKTSKDANQ | ||||||
Compositional bias | 378-409 | Basic and acidic residues | ||||
Sequence: SKAAGTSEQEEGIPDHGEKKSSPSRVNGGTDE | ||||||
Compositional bias | 422-438 | Basic and acidic residues | ||||
Sequence: LQPTEDEKGKAEGDNSG | ||||||
Compositional bias | 453-475 | Polar residues | ||||
Sequence: EVTVTSPQENEENEANKASSAVA |
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence & Isoform
- Sequence statusComplete
This entry describes 2 isoforms produced by Alternative splicing.
Q5DU00-1
This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
- Name1
- Length475
- Mass (Da)51,953
- Last updated2005-07-19 v2
- ChecksumB4195FC005B62F4A
Q5DU00-2
- Name2
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
R4GML1 | R4GML1_MOUSE | Dcdc2a | 475 |
Sequence caution
Features
Showing features for compositional bias, alternative sequence, sequence conflict.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 251-272 | Polar residues | ||||
Sequence: KGSGNYRQSKSTIGSSDNSSPQ | ||||||
Compositional bias | 273-292 | Basic and acidic residues | ||||
Sequence: PLKRKGKKDSNSEKPTKVKQ | ||||||
Alternative sequence | VSP_014672 | 308-368 | in isoform 2 | |||
Sequence: EGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKTSKDANQKEDFSAM → WLIKVERDTCLRPQLDGNRNRVTALPPYPWSIHTRHMWDAPGEDRWKKVTNKAQPTYGHSM | ||||||
Compositional bias | 312-361 | Basic and acidic residues | ||||
Sequence: KAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKTSKDANQ | ||||||
Alternative sequence | VSP_014673 | 369-475 | in isoform 2 | |||
Sequence: Missing | ||||||
Compositional bias | 378-409 | Basic and acidic residues | ||||
Sequence: SKAAGTSEQEEGIPDHGEKKSSPSRVNGGTDE | ||||||
Sequence conflict | 398 | in Ref. 2; CAI24561 | ||||
Sequence: S → A | ||||||
Compositional bias | 422-438 | Basic and acidic residues | ||||
Sequence: LQPTEDEKGKAEGDNSG | ||||||
Sequence conflict | 424 | in Ref. 2; CAI24561 | ||||
Sequence: P → S | ||||||
Compositional bias | 453-475 | Polar residues | ||||
Sequence: EVTVTSPQENEENEANKASSAVA |
Keywords
- Coding sequence diversity
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AK220370 EMBL· GenBank· DDBJ | BAD90429.1 EMBL· GenBank· DDBJ | mRNA | Different initiation | |
AL589735 EMBL· GenBank· DDBJ | CAI24561.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
BC045136 EMBL· GenBank· DDBJ | AAH45136.1 EMBL· GenBank· DDBJ | mRNA |