Q5BEP0 · YSH1_EMENI

Function

function

Component of the cleavage factor I (CF I) involved in pre-mRNA 3'-end processing.

Features

Showing features for binding site, active site.

1884100200300400500600700800
Type
IDPosition(s)Description
Binding site83Zn2+ 1 (UniProtKB | ChEBI)
Binding site85Zn2+ 1 (UniProtKB | ChEBI)
Binding site87Zn2+ 2 (UniProtKB | ChEBI)
Binding site88Zn2+ 2 (UniProtKB | ChEBI)
Binding site174Zn2+ 1 (UniProtKB | ChEBI)
Binding site195Zn2+ 1 (UniProtKB | ChEBI)
Binding site195Zn2+ 2 (UniProtKB | ChEBI)
Active site446Proton donor
Binding site468Zn2+ 2 (UniProtKB | ChEBI)

GO annotations

AspectTerm
Cellular ComponentmRNA cleavage and polyadenylation specificity factor complex
Molecular Function5'-3' RNA exonuclease activity
Molecular Functionmetal ion binding
Molecular FunctionRNA binding
Molecular FunctionRNA endonuclease activity
Biological ProcessmRNA processing

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Endoribonuclease ysh1
  • EC number
  • Alternative names
    • mRNA 3'-end-processing protein ysh1

Gene names

    • Name
      ysh1
    • ORF names
      AN0990

Organism names

Accessions

  • Primary accession
    Q5BEP0
  • Secondary accessions
    • C8VU78

Proteomes

Organism-specific databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00002389021-884Endoribonuclease ysh1

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for region, compositional bias.

Type
IDPosition(s)Description
Region595-626Disordered
Compositional bias605-619Basic and acidic residues
Region678-705Disordered
Compositional bias684-695Basic residues
Region734-780Disordered
Compositional bias762-780Polar residues

Sequence similarities

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    884
  • Mass (Da)
    97,685
  • Last updated
    2005-04-26 v1
  • MD5 Checksum
    8C84B972BF067EB81CDC38DC6AA7DFA4
MAAKRKAAAMNAVDDEPVDPSDELAFYCLGGGNEVGRSCHIIQYKGKTVMLDAGMHPAKEGFSALPFFDEFDLSTVDILLISHFHVDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVNNTASSSDQRTTLYTEHDHLSTLPLIETIDFNTTHTINSIRITPYPAGHVLGAAMFLISIAGLNILFTGDYSREEDRHLIPATVPRGVKIDVLITESTFGISSNPPRLEREAALMKSITGVLNRGGRVLMPVFALGRAQELLLILEEYWETHPELQKIPIYYIGNTARRCMVVYQTYIGAMNDNIKRLFRQRMAEAEASGDKSVSAGPWDFKYVRSLRSLERFDDVGGCVMLASPGMLQTGTSRELLERWAPNERNGVVMTGYSVEGTMAKQLLNEPDQIHAVMSRAATGMGRTRMNGNDEEQKIMIPRRCTVDEISFAAHVDGVENRNFIEEVSAPVVILVHGEKHQMMRLKSKLLSLNAEKTVKVKVYTPANCEEVRIPFRKDKIAKVVGKLAQTTLPTDNEDGDGPLMAGVLVQNGFDLSLMAPDDLREYAGLATTTITCKQHITLSSASMDLIKWALEGTFGAIEEIGTDEDAEKEDQQSESEEKQRMKEEADEEIPMEKPQAYLVMGCVVIRYHPRTREVELQWEGNMMNDGIADAVMAVLLTVESSPASVKQSAKHNKHHHHHHHDETDTLKFLNPHAAQDAEERFARLLMMLEAQFGSDIAPIERPRVPSSTESATTTTNGNGNSKSDSEQLSSLESKTDGATPQDPDTLSELEAAELSRLHALGIPVPGIEIKVDKHVARVWLEDLEVECANAVLRDRVRVVIERAVETVASMWSVGRSSKTITNGGGKEIAGTGADDVASKPGLEVAARA

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias605-619Basic and acidic residues
Compositional bias684-695Basic residues
Compositional bias762-780Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AACD01000015
EMBL· GenBank· DDBJ
EAA65558.1
EMBL· GenBank· DDBJ
Genomic DNA
BN001308
EMBL· GenBank· DDBJ
CBF88384.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

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