Q5AG97 · IFH1_CANAL

Function

function

Transcriptional coactivator that together with FHL1 regulates the expression of rRNA and ribosomal protein genes (PubMed:20231876, PubMed:23625919).
The FHL1-IFH1 complex is targeted to the ribosomal protein genes by the DNA-binding factor TBF1 (PubMed:23625919).

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentchromatin
Cellular Componentnucleus
Molecular Functiontranscription cis-regulatory region binding
Molecular Functiontranscription coregulator activity
Biological Processpositive regulation of transcription by RNA polymerase II
Biological Processregulation of ribosomal protein gene transcription by RNA polymerase II
Biological Processregulation of transcription by RNA polymerase II
Biological ProcessrRNA transcription

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Transcriptional regulator IFH1

Gene names

    • Name
      IFH1
    • ORF names
      CaO19.11758, CaO19.4282
    • Ordered locus names
      CAALFM_C502650CA

Organism names

Accessions

  • Primary accession
    Q5AG97
  • Secondary accessions
    • A0A1D8PNH2
    • Q5AGN3

Proteomes

Organism-specific databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00004260851-885Transcriptional regulator IFH1

Expression

Induction

Induced during biofilm formation.

Interaction

Subunit

Interacts with FLH1 and TBF1.

Protein-protein interaction databases

Family & Domains

Features

Showing features for compositional bias, region.

Type
IDPosition(s)Description
Compositional bias1-24Polar residues
Region1-138Disordered
Compositional bias54-79Acidic residues
Region150-201Disordered
Compositional bias170-185Polar residues
Compositional bias234-254Basic and acidic residues
Region234-275Disordered
Region291-410Disordered
Compositional bias343-376Acidic residues
Compositional bias391-407Acidic residues
Compositional bias465-505Basic and acidic residues
Region465-639Disordered
Compositional bias572-586Polar residues
Compositional bias599-618Acidic residues
Compositional bias621-639Polar residues
Region680-708Disordered
Region813-835Disordered

Sequence similarities

Belongs to the IFH1 family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    885
  • Mass (Da)
    98,826
  • Last updated
    2017-05-10 v2
  • Checksum
    F29CDE4A7D9BEB8B
MGYKNSDNTNNKFSRKSMSPSLTGGKGRKTVGKKVKKTIPRKTVNWSSYDVNSDSNEDSDEESENENDSDNDDEDDDETEHHHLDGLYSLMGKRPHDSSSNGDDDDDDDDDNDNKNIFSSTSSDGDSDEAMFSSSDDDSDVDFVKLQAQQKAHALKIAKARKGLKSKPKNESNDNAIASSSESESNSESDNEDDDDDVVSLKKLKPRKKSFLKYGRRRSDAVLPDINFKFEFDTGENDELEAGNQETHIKEPEEEDIGEEVDYSPENPVDSNNVPSLEFEFDHHLIEVPKINEEELNSDEDYEIDDNELLATLQAENDAEEFLPPITKGNSQPQRNDSLISSTIEEEENDNDNEEASKGGDGDDDDDDDDDENDPFLKEEEKYLVNEFETNGFDENEEDEDEDDLHTFDSDFSTTNRIVNSFKGIGEDRSKPIVKYESSVSGGSDYDEDDYIDLINFDVPLFDDKNGHLDGGKKNSHHKGNTDKLKKDKVKQRANSNHNSDEDDDSYLWNYFFSSDNDSSSEETDDKNNSKTVNKSRKNKKNKKALTNNAITGADELFEQIENDNTFKSKSKSNHHGNSLYKAYSDSPMTIQDLEAEIRAGADDDDDDDDDYDSSESTDVDESLPKSSSNNSLVGSSKKATEVLSSKTADYRPPKLGSWVTVDCKPFGVIDGLSTRTLQLNKSQEPRSAAQSGTSHSTSIVNSSNGSGLGLPTTSIASSLAANPRKSIVVGPTNVPSSMISSDDSALGLDELLNVSELDNDDENDVKIWRDFNNNQNKKKIPLGAFRNKSVLYNNHIYQDDQHHHLHRRNSNADKKFNGSGHIKKQQPIRRQSQSKIERRRASIVEAVSQGYRPTKSGLFSETALADVEELLGDDRDLMELIQGL

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias1-24Polar residues
Compositional bias54-79Acidic residues
Compositional bias170-185Polar residues
Compositional bias234-254Basic and acidic residues
Compositional bias343-376Acidic residues
Compositional bias391-407Acidic residues
Compositional bias465-505Basic and acidic residues
Compositional bias572-586Polar residues
Compositional bias599-618Acidic residues
Compositional bias621-639Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
CP017627
EMBL· GenBank· DDBJ
AOW29690.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

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