Q4P6D5 · SWC5_MYCMD

Function

function

Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Involved in chromosome stability (By similarity).

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Cellular ComponentSwr1 complex
Biological Processchromatin remodeling

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    SWR1-complex protein 5

Gene names

    • Name
      SWC5
    • ORF names
      UMAG_11753

Organism names

Accessions

  • Primary accession
    Q4P6D5
  • Secondary accessions
    • A0A0D1CK39

Proteomes

Organism-specific databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00002125111-354SWR1-complex protein 5

Interaction

Subunit

Component of the SWR1 chromatin remodeling complex.

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for compositional bias, region, domain.

Type
IDPosition(s)Description
Compositional bias1-11Polar residues
Region1-93Disordered
Compositional bias24-33Acidic residues
Compositional bias60-70Acidic residues
Region109-134Disordered
Region222-292Disordered
Domain272-354BCNT-C

Sequence similarities

Belongs to the SWC5 family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    354
  • Mass (Da)
    37,533
  • Last updated
    2015-09-16 v2
  • MD5 Checksum
    5D90AF7F40E4B0CB695AEF98F529C56F
MHSIANSSAPVSRSVRDMPNSGSDSDDDDDFVPDAEPSHTAVVRSGLSKQGKDAVVATDDPSDSDSDSDADGAHSETQDKPAGASVRAAEQIDADELEALRKEREELVAAAGGEQRLGKRRRLAHVSESGADNQVTNDNEVQALKAKAAAEWEAIKASESGSSMNEQVTQSTATGDYASATTLASTARQEMVSIPTTYKFAGELHTSMRLLPRSHPDALKYLSSQIASPTSTTSSAPAPSASASAPLPTSPASTSTSSSPSRPQPARPTPRRKKPSSLSALSAAATTKPTKLNTLEKSKLDWDTYKSDHSQLSQQELDELEHQTKRGGKGLGDMKGYLDRSDFLDRVKNRTAQP

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias1-11Polar residues
Compositional bias24-33Acidic residues
Compositional bias60-70Acidic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
CM003153
EMBL· GenBank· DDBJ
KIS67223.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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