The complete genome sequence of Escherichia coli K-12.Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K.[...], Shao Y.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainK12 / MG1655 / ATCC 47076CategoriesSequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCScience 277:1453-1462 (1997)Cited in99+4
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L.[...], Horiuchi T.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainK12 / W3110 / ATCC 27325 / DSM 5911CategoriesSequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCMol. Syst. Biol. 2:E1-E5 (2006)Cited in99+3
Small CRISPR RNAs guide antiviral defense in prokaryotes.Brouns S.J., Jore M.M., Lundgren M., Westra E.R., Slijkhuis R.J., Snijders A.P., Dickman M.J., Makarova K.S., Koonin E.V., van der Oost J.View abstractCited forSUBUNIT, DISRUPTION PHENOTYPEStrainK12 / W3110 / ATCC 27325 / DSM 5911CategoriesInteraction, Phenotypes & VariantsSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCScience 321:960-964 (2008)Cited in64
Involvement of the leucine response transcription factor LeuO in regulation of the genes for sulfa drug efflux.Shimada T., Yamamoto K., Ishihama A.View abstractCited forOPERON STRUCTURE, INDUCTION BY LEUOStrainK12 / BW25113CategoriesExpression, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCJ. Bacteriol. 191:4562-4571 (2009)Cited in32
Identification and characterization of E. coli CRISPR-cas promoters and their silencing by H-NS.Pul U., Wurm R., Arslan Z., Geissen R., Hofmann N., Wagner R.View abstractCited forINDUCTION BY H-NSStrainK12CategoriesExpressionSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCMol. Microbiol. 75:1495-1512 (2010)Cited in8
A dual function of the CRISPR-Cas system in bacterial antivirus immunity and DNA repair.Babu M., Beloglazova N., Flick R., Graham C., Skarina T., Nocek B., Gagarinova A., Pogoutse O., Brown G.[...], Yakunin A.F.View abstractCited forINTERACTION WITH YGBTStrainK12CategoriesInteractionSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCMol. Microbiol. 79:484-502 (2011)Cited in9
Envelope stress is a trigger of CRISPR RNA-mediated DNA silencing in Escherichia coli.Perez-Rodriguez R., Haitjema C., Huang Q., Nam K.H., Bernardis S., Ke A., DeLisa M.P.View abstractCited forINTERACTION WITH CASD AND CASE, SUBUNIT, INDUCTION BY BAER, ROLE IN PLASMID SILENCING, DISRUPTION PHENOTYPEStrainK12 / BW25113CategoriesFunction, Expression, Interaction, Phenotypes & VariantsSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCMol. Microbiol. 79:584-599 (2011)Cited in9
Structural basis for CRISPR RNA-guided DNA recognition by Cascade.Jore M.M., Lundgren M., van Duijn E., Bultema J.B., Westra E.R., Waghmare S.P., Wiedenheft B., Pul U., Wurm R.[...], Brouns S.J.View abstractCited forFUNCTION IN CASCADE, MASS SPECTROMETRY, SUBUNIT, STRUCTURE BY ELECTRON MICROSCOPY, INTERACTION WITH CASA; CASB; CASD AND CASE, DISRUPTION PHENOTYPEStrainK12CategoriesFunction, Sequences, Interaction, Phenotypes & Variants, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCNat. Struct. Mol. Biol. 18:529-536 (2011)Cited in5
Structures of the RNA-guided surveillance complex from a bacterial immune system.Wiedenheft B., Lander G.C., Zhou K., Jore M.M., Brouns S.J., van der Oost J., Doudna J.A., Nogales E.View abstractCited forSTRUCTURE BY ELECTRON MICROSCOPY OF CASCADE WITH AND WITHOUT TARGET RNA, RNA-BINDING, INTERACTION WITH CASA; CASB; CASD AND CASEStrainK12CategoriesFunction, Interaction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCNature 477:486-489 (2011)Cited in5
Helicase dissociation and annealing of RNA-DNA hybrids by Escherichia coli Cas3 protein.Howard J.A., Delmas S., Ivancic-Bace I., Bolt E.L.View abstractCited forFUNCTION IN R-LOOP FORMATION, SUBUNITStrainK12 / MG1655 / ATCC 47076CategoriesFunction, InteractionSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCBiochem. J. 439:85-95 (2011)Cited in5
CRISPR immunity relies on the consecutive binding and degradation of negatively supercoiled invader DNA by Cascade and Cas3.Westra E.R., van Erp P.B., Kunne T., Wong S.P., Staals R.H., Seegers C.L., Bollen S., Jore M.M., Semenova E.[...], van der Oost J.View abstractCited forSUBUNIT, CASCADE DNA-BINDINGStrainK12 / MG1655 / ATCC 47076CategoriesFunction, InteractionSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCMol. Cell 46:595-605 (2012)Cited in6
Structural basis for promiscuous PAM recognition in type I-E Cascade from E. coli.Hayes R.P., Xiao Y., Ding F., van Erp P.B., Rajashankar K., Bailey S., Wiedenheft B., Ke A.View abstractCategoriesStructureSourcePDB: 5H9E, PDB: 5H9FPubMedEurope PMCNature 530:499-503 (2016)Mapped to5
Mechanism of CRISPR-RNA guided recognition of DNA targets in Escherichia coli.van Erp P.B., Jackson R.N., Carter J., Golden S.M., Bailey S., Wiedenheft B.View abstractCategoriesStructureSourcePDB: 5CD4PubMedEurope PMCNucleic Acids Res 43:8381-8391 (2015)Mapped to5
Structural biology. Crystal structure of a CRISPR RNA-guided surveillance complex bound to a ssDNA target.Mulepati S., Heroux A., Bailey S.View abstractCategoriesStructureSourcePDB: 4QYZPubMedEurope PMCScience 345:1479-1484 (2014)Mapped to5
Crystal structure of the RNA-guided immune surveillance Cascade complex in Escherichia coli.Zhao H., Sheng G., Wang J., Wang M., Bunkoczi G., Gong W., Wei Z., Wang Y.View abstractCategoriesStructureSourcePDB: 4U7UPubMedEurope PMCNature 515:147-150 (2014)Mapped to5
Structural biology. Crystal structure of the CRISPR RNA-guided surveillance complex from Escherichia coli.Jackson R.N., Golden S.M., van Erp P.B., Carter J., Westra E.R., Brouns S.J., van der Oost J., Terwilliger T.C., Read R.J., Wiedenheft B.View abstractCategoriesStructureSourcePDB: 4TVXPubMedEurope PMCScience 345:1473-1479 (2014)Mapped to5
Large-scale identification of protein-protein interaction of Escherichia coli K-12.Arifuzzaman M., Maeda M., Itoh A., Nishikata K., Takita C., Saito R., Ara T., Nakahigashi K., Huang H.C.[...], Mori H.View abstractCategoriesInteractionSourceIntAct: Q46899PubMedEurope PMCGenome Res 16:686-691 (2006)Mapped to99+