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Q42399 · Q42399_BRANA

  • Protein
    Endo-polygalacturonidase
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Evidence at transcript level
  • Annotation score
    1/5

Function

Features

Showing features for active site.

143350100150200250300350400
TypeIDPosition(s)Description
Active site289

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Molecular Functionpolygalacturonase activity
Biological Processcarbohydrate metabolic process

Keywords

Protein family/group databases

Names & Taxonomy

Protein names

  • Submitted names
    • Endo-polygalacturonidase
    • Polygalacturonase

Organism names

  • Taxonomic identifier
  • Organism
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Brassiceae > Brassica

Accessions

  • Primary accession
    Q42399

Subcellular Location

Secreted, cell wall

Keywords

PTM/Processing

Features

Showing features for signal, chain.

Type
IDPosition(s)Description
Signal1-23
ChainPRO_501097336724-433

Family & Domains

Sequence similarities

Belongs to the glycosyl hydrolase 28 family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    433
  • Mass (Da)
    46,595
  • Last updated
    1996-11-01 v1
  • MD5 Checksum
    8DE996C0EB09DA84A649432DFF4558A9
MARCFGSLAVFLCVLLMLACCQALSSNVDDGYGHEDGSFESDSLIKLNNDDDVLTLKSSDRPTTESSTVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVTTFLIPKGKTYLLKSIRFRGPCKSLRSFQILGTLSASTKRSDYSNDKNHWLILEDVNNLSIDGGSAGIVDGNGNIWWQNSCKIDKSKPCTKAPTALTLYNLKNLNVKNLRVRNAQQIQISIEKCNNVGVKNVKITAPGDSPNTDGIHIVATKNIRISNSDIGTGDDCISIEDGSQNVQINDLTCGPGHGISIGSLGDDNSKAYVSGIDVDGATLSETDNGVRIKTYQGGSGTAKNIKFQNIRMDNVKNPIIIDQNYCDKDKCEQQESAVQVNNVVYQNIKGTSATDVAIMFNCSVKYPCQGIVLENVNIKGGKASCENVNVKDKGTVSPKCP

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
X95800
EMBL· GenBank· DDBJ
CAA65072.1
EMBL· GenBank· DDBJ
mRNA
X98373
EMBL· GenBank· DDBJ
CAA67020.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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