Q42347 · RL241_ARATH

Function

function

Might have an extraribosomal function in reinitiation of translation.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytosolic large ribosomal subunit
Cellular Componentendoplasmic reticulum
Molecular FunctionmRNA binding
Molecular Functionstructural constituent of ribosome

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Large ribosomal subunit protein eL24z
  • Alternative names
    • 60S ribosomal protein L24-1

Gene names

    • Name
      RPL24A
    • ORF names
      F13K3.2, F1O11.25
    • Ordered locus names
      At2g36620

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    Q42347
  • Secondary accessions
    • Q9LF73
    • Q9SKP1

Proteomes

Organism-specific databases

Genome annotation databases

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00002447391-164Large ribosomal subunit protein eL24z

Proteomic databases

PTM databases

Expression

Gene expression databases

Interaction

Subunit

Interacts with the cauliflower mosaic virus transactivator TAV to form a TAV/60S complex (PubMed:11572778).
Interacts with REIL1 AND REIL2 (PubMed:24603461).

Binary interactions

TypeEntry 1Entry 2Number of experimentsIntact
BINARY Q42347MAF19.20 F4K2103EBI-7217243, EBI-7216904

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for compositional bias, region.

TypeIDPosition(s)Description
Compositional bias117-136Basic and acidic residues
Region117-164Disordered

Sequence similarities

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    164
  • Mass (Da)
    18,850
  • Last updated
    2006-06-27 v2
  • Checksum
    BA88816244551DC0
MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKVEYASKQQKSQVKGNIPKSAAPKAAKMGGGGGRR

Sequence caution

The sequence CAA23385.1 differs from that shown. Reason: Erroneous initiation

Features

Showing features for sequence conflict, compositional bias.

TypeIDPosition(s)Description
Sequence conflict44in Ref. 6
Compositional bias117-136Basic and acidic residues
Sequence conflict150in Ref. 6; CAA23385

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AJ293729
EMBL· GenBank· DDBJ
CAC01930.1
EMBL· GenBank· DDBJ
mRNA
AC006282
EMBL· GenBank· DDBJ
AAD20138.2
EMBL· GenBank· DDBJ
Genomic DNA
AC006919
EMBL· GenBank· DDBJ
AAM15314.1
EMBL· GenBank· DDBJ
Genomic DNA
CP002685
EMBL· GenBank· DDBJ
AEC09274.1
EMBL· GenBank· DDBJ
Genomic DNA
AY058086
EMBL· GenBank· DDBJ
AAL24194.1
EMBL· GenBank· DDBJ
mRNA
AY072350
EMBL· GenBank· DDBJ
AAL62342.1
EMBL· GenBank· DDBJ
mRNA
AY114728
EMBL· GenBank· DDBJ
AAM48047.1
EMBL· GenBank· DDBJ
mRNA
AY085323
EMBL· GenBank· DDBJ
AAM62554.1
EMBL· GenBank· DDBJ
mRNA
F20030
EMBL· GenBank· DDBJ
CAA23385.1
EMBL· GenBank· DDBJ
mRNA Different initiation

Genome annotation databases

Similar Proteins

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