Q3YAA1 · Q3YAA1_DANRE

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcell surface
Cellular Componentfocal adhesion
Cellular Componentintegrin complex
Cellular Componentlamellipodium
Cellular Componentmelanosome
Cellular Componentruffle membrane
Cellular Componentsynapse
Molecular Functioncollagen binding involved in cell-matrix adhesion
Molecular Functionfibronectin binding
Molecular Functionintegrin binding
Molecular Functionprotein kinase binding
Molecular Functionsignaling receptor activity
Biological Processatrioventricular valve morphogenesis
Biological Processcell-cell adhesion
Biological ProcessERK1 and ERK2 cascade
Biological Processintegrin-mediated signaling pathway
Biological Processmuscle organ development
Biological Processphosphatidylinositol 3-kinase/protein kinase B signal transduction
Biological Processpositive regulation of sprouting angiogenesis

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Integrin beta

Gene names

    • Name
      itgb1a
    • Synonyms
      itgb1

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio

Accessions

  • Primary accession
    Q3YAA1

Proteomes

Organism-specific databases

Subcellular Location

Cell membrane
; Single-pass type I membrane protein
Cell projection, invadopodium membrane
; Single-pass type I membrane protein
Cell projection, lamellipodium
Cell projection, ruffle membrane
; Single-pass type I membrane protein
Melanosome
Membrane
; Single-pass type I membrane protein

Features

Showing features for transmembrane.

TypeIDPosition(s)Description
Transmembrane729-751Helical

Keywords

PTM/Processing

Features

Showing features for signal, chain, disulfide bond.

TypeIDPosition(s)Description
Signal1-20
ChainPRO_503503437221-798Integrin beta
Disulfide bond27↔464
Disulfide bond35↔45
Disulfide bond38↔75
Disulfide bond48↔64
Disulfide bond206↔212
Disulfide bond260↔300
Disulfide bond400↔414
Disulfide bond434↔691
Disulfide bond462↔466
Disulfide bond477↔489
Disulfide bond486↔525
Disulfide bond491↔500
Disulfide bond502↔516
Disulfide bond531↔536
Disulfide bond533↔568
Disulfide bond538↔553
Disulfide bond555↔560
Disulfide bond574↔579
Disulfide bond576↔607
Disulfide bond581↔590
Disulfide bond592↔599
Disulfide bond613↔618
Disulfide bond615↔661
Disulfide bond620↔630
Disulfide bond633↔636
Disulfide bond640↔649
Disulfide bond646↔723
Disulfide bond665↔699

Keywords

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain26-76PSI
Domain34-464Integrin beta subunit VWA
Domain640-728Integrin beta subunit tail
Domain752-798Integrin beta subunit cytoplasmic

Sequence similarities

Belongs to the integrin beta chain family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    798
  • Mass (Da)
    88,592
  • Last updated
    2005-09-27 v1
  • Checksum
    3A6514ADB6A2C46E
MDLKLLFISALLGIISCSRAQQEGNECIKANALSCGECIQVGDKCGWCTDAEFLKQGEPTSARCDELESLKKRGCAEAKIENPHGSQRILKNTPVTNRKKGAEKLRPEDITQIQPQKLSLQLRSGEPQNIKLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMKEMSKITSDFRIGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGQRFNSLVGQQQISGNLDSPEGGFDAIMQVAVCGEHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGRCHLENDMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVINLIVDAYNSLSSEVILENSKLPEGVTITYQSRCKNGVVNEGESGRKCSNISIGDEVSFNINITAQGCPKQGKTETIKIKPLGFTEEVEITLSFICECECHKHAMKNSPLCHNGNGSFECGACRCNKGRVGRQCECRKDEVSTEDLDKNCRKDNGTDICSNNGECVCGTCECKKRENPEERYSGKYCECDNFNCDRSNNKLCGGHGRCECRVCVCDANYTGSACDCSLDTSTCLASNKQICNGRGICECGTCRCTDPKFQGPTCEICPTCPGVCTEHKECVQCRAFGTGEKKDTCKRDCSYFNLIEVEDRDKLPQPVQAFPLMHCKERDARDCWFYYTYAVNNNTEKEVHVVKTMECPPGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVINPKYEGK

Computationally mapped potential isoform sequences

There are 2 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
A0A8M6YW86A0A8M6YW86_DANREitgb1a802
F1QG85F1QG85_DANREitgb1a798

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
DQ149101
EMBL· GenBank· DDBJ
AAZ78240.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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