Q3U1C6 · TATD3_MOUSE

  • Protein
    Putative deoxyribonuclease TATDN3
  • Gene
    Tatdn3
  • Status
    UniProtKB reviewed (Swiss-Prot)
  • Amino acids
  • Protein existence
    Evidence at protein level
  • Annotation score
    3/5

Function

function

Putative deoxyribonuclease.

Cofactor

a divalent metal cation (UniProtKB | Rhea| CHEBI:60240 )

Note: Binds 2 divalent metal cations per subunit.

Features

Showing features for binding site.

129420406080100120140160180200220240260280
TypeIDPosition(s)Description
Binding site9a divalent metal cation 1 (UniProtKB | ChEBI)
Binding site11a divalent metal cation 1 (UniProtKB | ChEBI)
Binding site104a divalent metal cation 1 (UniProtKB | ChEBI)
Binding site104a divalent metal cation 2 (UniProtKB | ChEBI)
Binding site144a divalent metal cation 2 (UniProtKB | ChEBI)
Binding site167a divalent metal cation 2 (UniProtKB | ChEBI)
Binding site215a divalent metal cation 1 (UniProtKB | ChEBI)

GO annotations

AspectTerm
Cellular Componentmitochondrion
Cellular Componentnucleus
Molecular Functionmetal ion binding
Molecular Functionnuclease activity

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Putative deoxyribonuclease TATDN3
  • EC number

Gene names

    • Name
      Tatdn3

Organism names

  • Taxonomic identifier
  • Strains
    • C57BL/6J
    • NOD
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Glires > Rodentia > Myomorpha > Muroidea > Muridae > Murinae > Mus > Mus

Accessions

  • Primary accession
    Q3U1C6
  • Secondary accessions
    • Q6P8H6
    • Q9DB58

Proteomes

Organism-specific databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00003135961-294Putative deoxyribonuclease TATDN3

Proteomic databases

PTM databases

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Miscellaneous

Structure

Family & Domains

Sequence similarities

Phylogenomic databases

Family and domain databases

Sequence & Isoforms

Align isoforms (3)
  • Sequence status
    Complete

This entry describes 3 isoforms produced by Alternative splicing.

Q3U1C6-1

This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

  • Length
    294
  • Mass (Da)
    32,436
  • Last updated
    2005-10-11 v1
  • Checksum
    8BD2EDF6678D75F4
MGLGLVDCHCHLSASDFDNDLDDVLEKARKANVMALVAVAEHAGEFERIMQLSERYNGFVLPCLGVHPVQELSPEKPRSVTLKDLDVALPIIEKYKDRLLAIGEVGLDFTPRYAGTDEEKEEQRQVLIRQVQLAKRLNVPLNVHSRSAGRPTISLLREQGAEQVLLHAFDGRPSVAMEGVRAGYYFSIPPSIVRSGQKQKLVKQLPLSSICLETDSPALGPEKLTRNEPCNISIAAEFIAQVKGISVEEVREVTTRNAFRLFPKLQSLLQKELQSHPLQAKSAQGSAGESKGLL

Q3U1C6-2

  • Name
    2
  • See also
    sequence in UniParc or sequence clusters in UniRef
  • Differences from canonical
    • 225-236: TRNEPCNISIAA → LCSLSDTE

Q3U1C6-3

  • Name
    3
  • See also
    sequence in UniParc or sequence clusters in UniRef
  • Differences from canonical
    • 160-189: GAEQVLLHAFDGRPSVAMEGVRAGYYFSIP → EAEACETAASEFYLLRNRFTCARTRKADTE
    • 190-294: Missing

Computationally mapped potential isoform sequences

There are 3 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
D3YXH9D3YXH9_MOUSETatdn3293
D3Z0V5D3Z0V5_MOUSETatdn3232
E9QL22E9QL22_MOUSETatdn3294

Sequence caution

The sequence AAH61248.1 differs from that shown. Reason: Erroneous initiation

Features

Showing features for sequence conflict, alternative sequence.

Type
IDPosition(s)Description
Sequence conflict27in Ref. 1; BAB23875
Alternative sequenceVSP_030049160-189in isoform 3
Alternative sequenceVSP_030050190-294in isoform 3
Alternative sequenceVSP_030051225-236in isoform 2

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AK005193
EMBL· GenBank· DDBJ
BAB23875.1
EMBL· GenBank· DDBJ
mRNA
AK156071
EMBL· GenBank· DDBJ
BAE33572.1
EMBL· GenBank· DDBJ
mRNA
BC061248
EMBL· GenBank· DDBJ
AAH61248.1
EMBL· GenBank· DDBJ
mRNA Different initiation

Genome annotation databases

Similar Proteins

Disclaimer

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