Q38851 · MYB6_ARATH

Function

Features

Showing features for dna binding.

123620406080100120140160180200220
TypeIDPosition(s)Description
DNA binding37-61H-T-H motif
DNA binding89-112H-T-H motif

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA-binding transcription factor activity
Molecular Functiontranscription cis-regulatory region binding

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Transcription repressor MYB6
  • Alternative names
    • Myb-related protein 6 (AtMYB6)

Gene names

    • Name
      MYB6
    • ORF names
      T15G18.120
    • Ordered locus names
      At4g09460

Organism names

  • Taxonomic identifier
  • Strains
    • cv. Landsberg erecta
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    Q38851
  • Secondary accessions
    • Q9SAM3

Proteomes

Organism-specific databases

Genome annotation databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00003588321-236Transcription repressor MYB6

Proteomic databases

Expression

Tissue specificity

Expressed in roots, stems, flower buds, and siliques.

Induction

By ethylene, asbscisic acid (ABA), auxin (IAA), and Pseudomonas syringae pv. phaseolica.

Gene expression databases

Interaction

Subunit

Interacts with BHLH012/MYC1 and BHLH042/TT8.

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for domain, region.

TypeIDPosition(s)Description
Domain9-61HTH myb-type 1
Domain62-116HTH myb-type 2
Region159-181Disordered

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    236
  • Mass (Da)
    26,474
  • Last updated
    1996-11-01 v1
  • Checksum
    D53F9AC798D7BBCB
MGRSPCCEKAHTNKGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWINYLRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSHGIDPQTHRQINESKTVSSQVVVPIQNDAVEYSFSNLAVKPKTENSSDNGASTSGTTTDEDLRQNGECYYSDNSGHIKLNLDLTLGFGSWSGRIVGVGSSADSKPWCDPVMEARLSLL

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
U26936
EMBL· GenBank· DDBJ
AAA98761.1
EMBL· GenBank· DDBJ
mRNA
AY519604
EMBL· GenBank· DDBJ
AAS10074.1
EMBL· GenBank· DDBJ
mRNA
AL161515
EMBL· GenBank· DDBJ
CAB78069.1
EMBL· GenBank· DDBJ
Genomic DNA
CP002687
EMBL· GenBank· DDBJ
AEE82750.1
EMBL· GenBank· DDBJ
Genomic DNA
BT004171
EMBL· GenBank· DDBJ
AAO42191.1
EMBL· GenBank· DDBJ
mRNA
BT005085
EMBL· GenBank· DDBJ
AAO50618.1
EMBL· GenBank· DDBJ
mRNA
AY086813
EMBL· GenBank· DDBJ
AAM63862.1
EMBL· GenBank· DDBJ
mRNA
Z95782
EMBL· GenBank· DDBJ
CAB09214.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

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