Q338K5 · Q338K5_ORYSJ

Function

function

Component of the sequence-specific heterotrimeric transcription factor (NF-Y) which specifically recognizes a 5'-CCAAT-3' box motif found in the promoters of its target genes.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA binding
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specific
Biological Processregulation of transcription by RNA polymerase II

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Nuclear transcription factor Y subunit

Gene names

    • Name
      OsHAP2I
    • Synonyms
      NF-Y21
    • ORF names
      OSNPB_100397900
    • Ordered locus names
      LOC_Os10g25850
      , Os10g0397900

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Nipponbare
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa

Accessions

  • Primary accession
    Q338K5

Proteomes

Genome annotation databases

Subcellular Location

Keywords

  • Cellular component

PTM/Processing

Proteomic databases

Interaction

Subunit

Heterotrimer.

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for compositional bias, region.

TypeIDPosition(s)Description
Compositional bias1-15Polar residues
Region1-21Disordered
Region134-166Disordered
Compositional bias137-166Polar residues

Sequence similarities

Belongs to the NFYA/HAP2 subunit family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    166
  • Mass (Da)
    18,314
  • Last updated
    2006-08-22 v2
  • Checksum
    333EC2FC108727AD
MGFGESTQGNQRKLDGPGKVSTELSLVNLEAKNLHPKPECNQPIEHIPTKGMKCTPLLPLPTEHADDEPIYVNAKQYHAIIRRRQRRKIVGSEDKVAAIRKRILVEARQKQAKLRHRGKGGRFISIEHPLELSMDDQISKNGGSASPSSSTVSENSSNVNGFTGDL

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias1-15Polar residues
Compositional bias137-166Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
DP000086
EMBL· GenBank· DDBJ
ABB47528.2
EMBL· GenBank· DDBJ
Genomic DNA
EU847005
EMBL· GenBank· DDBJ
ACJ54908.1
EMBL· GenBank· DDBJ
mRNA
HQ731478
EMBL· GenBank· DDBJ
ADZ40492.1
EMBL· GenBank· DDBJ
mRNA
AP014966
EMBL· GenBank· DDBJ
BAT10722.1
EMBL· GenBank· DDBJ
Genomic DNA
BR000373
EMBL· GenBank· DDBJ
FAA00424.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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