Q1EK81 · Q1EK81_PICAB
- ProteinPutative cryptochrome
- Genecry
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids259 (go to sequence)
- Protein existenceInferred from homology
- Annotation score2/5
Function
Cofactor
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | cytoplasm | |
Cellular Component | nucleus | |
Molecular Function | deoxyribodipyrimidine photo-lyase activity | |
Molecular Function | DNA binding | |
Molecular Function | FAD binding | |
Biological Process | circadian regulation of gene expression | |
Biological Process | entrainment of circadian clock by photoperiod |
Keywords
- Ligand
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Strains
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Pinopsida > Pinidae > Conifers I > Pinales > Pinaceae > Picea
Accessions
- Primary accessionQ1EK81
Subcellular Location
UniProt Annotation
GO Annotation
Structure
Family & Domains
Features
Showing features for domain, compositional bias, region.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Domain | 1-96 | Cryptochrome/DNA photolyase FAD-binding | |||
Domain | 133-248 | Cryptochrome C-terminal | |||
Compositional bias | 228-252 | Polar residues | |||
Region | 228-259 | Disordered | |||
Sequence similarities
Belongs to the DNA photolyase class-1 family.
Family and domain databases
Sequence
- Sequence statusFragment
- Length259
- Mass (Da)28,443
- Last updated2006-07-11 v1
- MD5 Checksum2C256C8774828A23B049104F9CB68C6B
Features
Showing features for non-terminal residue, compositional bias.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Non-terminal residue | 1 | ||||
Compositional bias | 228-252 | Polar residues | |||
Non-terminal residue | 259 | ||||
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AM267811 EMBL· GenBank· DDBJ | CAK26672.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267812 EMBL· GenBank· DDBJ | CAK26673.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267813 EMBL· GenBank· DDBJ | CAK26674.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267815 EMBL· GenBank· DDBJ | CAK26676.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267816 EMBL· GenBank· DDBJ | CAK26677.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267817 EMBL· GenBank· DDBJ | CAK26678.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267818 EMBL· GenBank· DDBJ | CAK26679.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267819 EMBL· GenBank· DDBJ | CAK26680.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267820 EMBL· GenBank· DDBJ | CAK26681.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267821 EMBL· GenBank· DDBJ | CAK26682.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267822 EMBL· GenBank· DDBJ | CAK26683.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267825 EMBL· GenBank· DDBJ | CAK26686.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267826 EMBL· GenBank· DDBJ | CAK26687.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267827 EMBL· GenBank· DDBJ | CAK26688.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267829 EMBL· GenBank· DDBJ | CAK26690.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267830 EMBL· GenBank· DDBJ | CAK26691.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267831 EMBL· GenBank· DDBJ | CAK26692.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267834 EMBL· GenBank· DDBJ | CAK26695.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267836 EMBL· GenBank· DDBJ | CAK26697.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267837 EMBL· GenBank· DDBJ | CAK26698.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267838 EMBL· GenBank· DDBJ | CAK26699.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267839 EMBL· GenBank· DDBJ | CAK26700.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267842 EMBL· GenBank· DDBJ | CAK26703.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267843 EMBL· GenBank· DDBJ | CAK26704.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267844 EMBL· GenBank· DDBJ | CAK26705.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267845 EMBL· GenBank· DDBJ | CAK26706.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267846 EMBL· GenBank· DDBJ | CAK26707.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267847 EMBL· GenBank· DDBJ | CAK26708.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267850 EMBL· GenBank· DDBJ | CAK26711.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267851 EMBL· GenBank· DDBJ | CAK26712.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267852 EMBL· GenBank· DDBJ | CAK26713.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267853 EMBL· GenBank· DDBJ | CAK26714.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267854 EMBL· GenBank· DDBJ | CAK26715.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267855 EMBL· GenBank· DDBJ | CAK26716.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267856 EMBL· GenBank· DDBJ | CAK26717.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267857 EMBL· GenBank· DDBJ | CAK26718.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267858 EMBL· GenBank· DDBJ | CAK26719.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267859 EMBL· GenBank· DDBJ | CAK26720.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AM267862 EMBL· GenBank· DDBJ | CAK26723.1 EMBL· GenBank· DDBJ | Genomic DNA |