Q1ED06 · Q1ED06_DANRE

Function

Features

Showing features for dna binding.

165050100150200250300350400450500550600650
TypeIDPosition(s)Description
DNA binding97-144Homeobox
DNA binding256-315Homeobox
DNA binding487-540Homeobox

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA binding
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specific
Biological Processregulation of transcription by RNA polymerase II

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Homeobox and leucine zipper protein Homez
    • Homeodomain leucine zipper protein

Gene names

    • Name
      homeza
    • Synonyms
      cb1072
      , cb1090
      , homez
      , si:zc14a17.9
      , wu:fa01h04
      , wu:fc54c08

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio

Accessions

  • Primary accession
    Q1ED06

Proteomes

    • Identifier
    • Component
      Alternate scaffold 2, Chromosome 2

Organism-specific databases

Subcellular Location

Keywords

  • Cellular component

Family & Domains

Features

Showing features for region, compositional bias, domain.

TypeIDPosition(s)Description
Region20-64Disordered
Compositional bias36-51Basic and acidic residues
Domain95-143Homeobox
Compositional bias156-184Basic and acidic residues
Region156-265Disordered
Compositional bias240-254Polar residues
Domain254-314Homeobox
Region321-373Disordered
Compositional bias325-354Polar residues
Compositional bias355-370Basic and acidic residues
Region400-485Disordered
Compositional bias432-482Polar residues
Domain485-539Homeobox
Region562-595Disordered
Compositional bias565-595Polar residues

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    650
  • Mass (Da)
    73,009
  • Last updated
    2006-07-11 v1
  • Checksum
    2E14BA1232A5BEF5
MATHSVHDLKIISPRGVAVKRQDGTFTSSKQQKSPYQHNSDRKEHASASNHRPRESNGTTAASFSTNNNSVVCLPLVSEGLKLVWTQSDQTRELDSIPELVQAFNIFPYPTSQEVSTLARVCTLPLDKVKVWFMVQRIKYGISWASEDIEETRLKLARPEQKTETEHKESSTKRKNDSKDFTEVEDLAQSPQMPRKRPKTESTEPAKLSPAPSRFRSSLPPPQDSYYYRQPVEIPETPQAATPPTATESPVVSEQPRHSRYKKSKAQLTALRKSFLQENWPDETELQRLQDETSLTRNEIRKWFSDSRYQLRMGRGLQMSLPATQGEKDDPNCSLSPQSQEAQPLSLTTKKQTTQHVDNKGKDKTCVKGSRRNRPKTSQFFQLFLSNTLESFEEGTIRVDEEKCSEESETQNNDEVASEQESEGRCVATPEPAAPTSSSSPPSITPSKKHTARSSKSARKSNSLNTSLNLPDNSSPSSVLTVAGRPRKTKEQLTILKEYFQHCPWPKSGEYTEVVELTSLPRADVIQWFGDTRYAVKNGHVRWVHADVREQVLAEIAMLQSGAADGSGTPGSEGNRKRKSQGNGTPKTQKSAADSVDVSPLELYFRQTGPLQEKDLDNLCRKSKMSYQQVRDWFASKDSTTLDTELTVAD

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias36-51Basic and acidic residues
Compositional bias156-184Basic and acidic residues
Compositional bias240-254Polar residues
Compositional bias325-354Polar residues
Compositional bias355-370Basic and acidic residues
Compositional bias432-482Polar residues
Compositional bias565-595Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
BC117599
EMBL· GenBank· DDBJ
AAI17600.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

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