Q1ECW8 · Q1ECW8_DANRE

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytoplasm
Cellular Componentnucleus
Cellular Componenttranscription regulator complex
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specific
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA binding
Molecular FunctionSMAD binding
Biological Processcardiac conduction
Biological Processcartilage development
Biological Processdorsal/ventral pattern formation
Biological Processheart looping
Biological Processnegative regulation of BMP signaling pathway
Biological Processnegative regulation of transcription by RNA polymerase II
Biological Processnegative regulation of transforming growth factor beta receptor signaling pathway

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Ski oncogene
  • Alternative names
    • Proto-oncogene c-Ski

Gene names

    • Name
      skia
    • Synonyms
      id:ibd1250

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio

Accessions

  • Primary accession
    Q1ECW8

Proteomes

    • Identifier
    • Component
      Alternate scaffold 8, Chromosome 8

Organism-specific databases

Family & Domains

Features

Showing features for domain, region, compositional bias.

TypeIDPosition(s)Description
Domain198-293c-SKI SMAD4-binding
Region299-375Disordered
Compositional bias310-334Basic and acidic residues
Compositional bias336-350Polar residues
Region398-548Disordered
Compositional bias403-422Polar residues
Compositional bias475-500Polar residues
Region705-727Disordered

Sequence similarities

Belongs to the SKI family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    727
  • Mass (Da)
    80,886
  • Last updated
    2006-07-11 v1
  • Checksum
    FFDAEFEDCCFA1A70
METVARQSFQPHPGLQQTLKQFHLSSMISLGGPAAFSARWQHDLLFKKDGKDIPEPVLHLPPMQPPPVMPGPLFIPSDRSTERCETVLEGETISCFVVGGEKRLCLPQILNTVLRDFSLQQINSVCDDLHIYCSRCTADQLEILKVMGILPFAAPSCGLITKTDAERLCNALIYGGTYPPHSKKELYGSIELELTEKSFKIYHECFGKCKGLLVPELYTSPNAPCIQCMDCRLMYPTHKFVVHSHKSLENRTCHWGFDSANWRAYVLLSPDYTGKEEKARLEQLLDDIKEKFDFSNKYKRKASQASDPIPAKKPKHDDFPAQSPSGDKDKQPDWLRSLSASANKGLNCIQPRQRPSAFRPWSPNISVSDKDGAGRPASMLRESFYNYKSLESAVAPNVALTPPQKGGQASPSAPSSSHPHGAESEGASRGRKRRLTGDTQPSPQPCAAATASKPLPASPEEHESDVEVEVESREELTSSLSSLSSPSFPSSSSAKDLSSPSGPVATLPAVVTPAAGPPEGPLLSGGEGHAMNNLESELETLRQALDNGLDSKESKEKFLHEIVKMRVKQEEKLGSALQAKRSLQQELEFLRVAKKEKLREATEAKRNLRKEIERLRAESERKMREANESRMRLKRELEQARQLRVCDKGCEAGRLRAKYSAQIEDLQVKLQHAEADREQLRADLIHEREAREHLERVVKELQVQLWPKSPSKNGTDVAHPPAKDSNN

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias310-334Basic and acidic residues
Compositional bias336-350Polar residues
Compositional bias403-422Polar residues
Compositional bias475-500Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
BC117641
EMBL· GenBank· DDBJ
AAI17642.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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