Q1EBV6 · BPM5_ARATH

Function

function

May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.

Pathway

Protein modification; protein ubiquitination.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytosol
Cellular Componentnucleus
Biological Processcellular response to salt stress
Biological Processcellular response to water deprivation
Biological Processprotein ubiquitination
Biological Processresponse to osmotic stress

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    BTB/POZ and MATH domain-containing protein 5
  • Alternative names
    • Protein BTB-POZ AND MATH DOMAIN 5 (AtBPM5)

Gene names

    • Name
      BPM5
    • ORF names
      F22D1, T10F18.30
    • Ordered locus names
      At5g21010

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    Q1EBV6
  • Secondary accessions
    • Q8LFW4
    • Q94B33

Proteomes

Organism-specific databases

Genome annotation databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00004052691-410BTB/POZ and MATH domain-containing protein 5

Proteomic databases

PTM databases

Expression

Tissue specificity

Ubiquitous.

Induction

By drought.

Gene expression databases

Interaction

Subunit

Heterodimer with BPM1 and BPM3. Interacts with RAP2-4. Binds to MYB56 at the promoter of FLOWERING LOCUS T (FT) (PubMed:25343985).

Binary interactions

TypeEntry 1Entry 2Number of experimentsIntact
BINARY Q1EBV6ERF060 O656653EBI-630650, EBI-7529041

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for region, domain.

TypeIDPosition(s)Description
Region1-24Disordered
Domain28-162MATH
Domain198-264BTB

Domain

The BTB/POZ domain mediates the interaction with some component of ubiquitin ligase complexes.

Sequence similarities

Belongs to the Tdpoz family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    410
  • Mass (Da)
    45,191
  • Last updated
    2006-07-11 v1
  • Checksum
    0AC2FE4586F092B2
MSESVIQGSNPDRVLSPTSSKSVTQTVNGSHQFVIQGYSLAKGMGIGKHIASDNFSVGGYQWGIFFYPDGKNPEDNSSYVSVFIALASEGTEVRALFELALVDQSGKGKHKVHSHFERSLDGGPYTLKYRGSMWGYKRFFRRSILETSDYLKDDCLIINCTVGVVVSEILCPQLHSVHVPDSELGSHFGVLLDSMEGSDITFNIAGEKFLAHKLVLAARSPFFKSKFFSEFEANNTEVTINDLEPKVFKALLQFMYKDSLPEDVEPATAHTFERLKLSEIYETLIVKVLAAADKYDLIRLRLLCESHICKGVSVKSVAKILALADRYNAKELKGVCLKFTAENLAAVLETDAYQQMKDECVTLQSELLKAVAGHEEGSNSTGGAKSQSVWAQLSDGGGDTTSRHVRQRTT

Sequence caution

The sequence AAK68819.1 differs from that shown. Reason: Frameshift

Features

Showing features for sequence conflict.

TypeIDPosition(s)Description
Sequence conflict57in Ref. 5; AAM61175

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AC069325
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.
AF296834
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.
CP002688
EMBL· GenBank· DDBJ
AED92919.1
EMBL· GenBank· DDBJ
Genomic DNA
AY042879
EMBL· GenBank· DDBJ
AAK68819.1
EMBL· GenBank· DDBJ
mRNA Frameshift
BT025978
EMBL· GenBank· DDBJ
ABG25067.1
EMBL· GenBank· DDBJ
mRNA
AY084611
EMBL· GenBank· DDBJ
AAM61175.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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